Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC196A0A1B0GTZ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC196A0A1B0GTZ2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC196A0A1B0GTZ2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCDC196A0A1B0GTZ2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC196A0A1B0GTZ2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC104417.2-201ENST00000562989 1793 ntBASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 GCSHP5-201ENST00000443090 522 ntBASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC098590.1-201ENST00000468126 897 ntBASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 RARRES2P10-201ENST00000564312 460 ntBASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 TMEM191A-211ENST00000637163 1067 ntBASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC196A0A1B0GTZ2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC116562.4-201ENST00000641316 2276 ntBASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 UBE2SP1-201ENST00000450587 669 ntBASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 AL353708.3-201ENST00000610272 989 ntBASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 HTR7P1-201ENST00000538670 1336 ntBASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC196A0A1B0GTZ2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 HLA-A-209ENST00000638375 975 ntBASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC196A0A1B0GTZ2 AC005332.7-201ENST00000614046 2005 ntBASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 AL158047.1-201ENST00000445918 881 ntBASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 AP002982.1-201ENST00000492365 877 ntBASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC196A0A1B0GTZ2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms