Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 KRT16P6-202ENST00000425692 1426 ntBASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 SERBP1P1-201ENST00000396021 1160 ntBASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV13-2A0A0B4J235 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AL031598.1-201ENST00000561511 1773 ntBASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AC093525.10-201ENST00000625130 1569 ntBASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 SNX3-202ENST00000349379 890 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AC133561.4-201ENST00000566112 224 ntBASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AC012354.3-201ENST00000623734 483 ntBASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AC068880.1-201ENST00000507289 2297 ntBASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV13-2A0A0B4J235 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms