Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CNOT6Q9ULM6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 AC098818.2-201ENST00000564925 2320 ntBASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT6Q9ULM6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 BX323043.1-201ENST00000641006 1765 ntBASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 AC233702.5-201ENST00000584107 538 ntBASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 HTR7P1-201ENST00000538670 1336 ntBASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT6Q9ULM6 TMEM179-206ENST00000616017 1645 ntBASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT6Q9ULM6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms