Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 TREX1-205ENST00000625293 1783 ntBASIC16.4■□□□□ 0.22
RNF7Q9UBF6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF7Q9UBF6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
RNF7Q9UBF6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF7Q9UBF6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.38■□□□□ 0.21
RNF7Q9UBF6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF7Q9UBF6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AP001412.1-201ENST00000608405 714 ntBASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AL353708.3-201ENST00000610272 989 ntBASIC16.37■□□□□ 0.21
RNF7Q9UBF6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF7Q9UBF6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms