Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 LINC00896-202ENST00000609602 2128 ntBASIC14.26□□□□□ -0.13
VAMP8Q9BV40 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 CICP6-201ENST00000457191 2729 ntBASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 AC063926.3-201ENST00000624734 5658 ntBASIC14.26□□□□□ -0.13
VAMP8Q9BV40 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP8Q9BV40 ESPNP-201ENST00000270691 2015 ntBASIC14.25□□□□□ -0.13
VAMP8Q9BV40 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 AL596257.1-201ENST00000641463 2694 ntBASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VAMP8Q9BV40 AC073592.3-201ENST00000625118 1834 ntBASIC14.25□□□□□ -0.13
VAMP8Q9BV40 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 AC011484.1-201ENST00000377652 1995 ntBASIC14.24□□□□□ -0.13
VAMP8Q9BV40 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 AL034346.1-201ENST00000568244 1277 ntBASIC14.24□□□□□ -0.13
VAMP8Q9BV40 RAP2CP1-202ENST00000605179 643 ntBASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VAMP8Q9BV40 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VAMP8Q9BV40 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VAMP8Q9BV40 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms