Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 AC128676.1-201ENST00000454392 318 ntBASIC22.99■■□□□ 1.27
NEK1Q96PY6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEK1Q96PY6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NEK1Q96PY6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEK1Q96PY6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NEK1Q96PY6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEK1Q96PY6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NEK1Q96PY6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.99■■□□□ 1.27
NEK1Q96PY6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 KRASP1-201ENST00000407852 552 ntBASIC22.98■■□□□ 1.27
NEK1Q96PY6 AC239809.2-201ENST00000415381 517 ntBASIC22.98■■□□□ 1.27
NEK1Q96PY6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 AC004264.1-201ENST00000608354 794 ntBASIC22.98■■□□□ 1.27
NEK1Q96PY6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.98■■□□□ 1.27
NEK1Q96PY6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NEK1Q96PY6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NEK1Q96PY6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.97■■□□□ 1.27
NEK1Q96PY6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 SDHAP1-207ENST00000440850 2000 ntBASIC22.96■■□□□ 1.27
NEK1Q96PY6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 AC124016.1-201ENST00000609552 612 ntBASIC22.96■■□□□ 1.27
NEK1Q96PY6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.96■■□□□ 1.27
NEK1Q96PY6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NEK1Q96PY6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NEK1Q96PY6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NEK1Q96PY6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
NEK1Q96PY6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.95■■□□□ 1.26
NEK1Q96PY6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NEK1Q96PY6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms