Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 HLA-G-202ENST00000376815 851 ntBASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 HLA-G-203ENST00000376818 1127 ntBASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 CYP2T3P-201ENST00000601990 817 ntBASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC47A1Q96FL8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 LETM1P2-201ENST00000597330 2178 ntBASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC47A1Q96FL8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC47A1Q96FL8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms