Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPS14-204ENST00000518139 669 ntTSL 310.61□□□□□ -0.716e-35■■□□□ 14.1
LARP4Q71RC2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.458e-9■■□□□ 14.1
LARP4Q71RC2 ATP5D-203ENST00000588538 1393 ntTSL 1 (best)17.76■□□□□ 0.438e-9■■□□□ 14.1
LARP4Q71RC2 ATP5D-205ENST00000590265 1144 ntTSL 1 (best)17.5■□□□□ 0.398e-9■■□□□ 14.1
LARP4Q71RC2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.398e-9■■□□□ 14.1
LARP4Q71RC2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.178e-9■■□□□ 14.1
LARP4Q71RC2 EIF3G-210ENST00000590158 1034 ntTSL 214.71□□□□□ -0.057e-7■■□□□ 14.1
LARP4Q71RC2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.227e-7■■□□□ 14.1
LARP4Q71RC2 EIF3G-213ENST00000593054 453 ntTSL 59.99□□□□□ -0.817e-7■■□□□ 14.1
LARP4Q71RC2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.211e-24■■□□□ 14.1
LARP4Q71RC2 PEBP1-202ENST00000542939 708 ntTSL 313.34□□□□□ -0.271e-24■■□□□ 14.1
LARP4Q71RC2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.225e-9■■□□□ 14.1
LARP4Q71RC2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.46□□□□□ -0.255e-9■■□□□ 14.1
LARP4Q71RC2 SARS-203ENST00000468588 1582 ntTSL 24.79□□□□□ -1.645e-9■■□□□ 14.1
LARP4Q71RC2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.631e-10■■□□□ 14.1
LARP4Q71RC2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.36□□□□□ -0.111e-10■■□□□ 14.1
LARP4Q71RC2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-10■■□□□ 14.1
LARP4Q71RC2 CAPNS1-202ENST00000586851 616 ntTSL 37.76□□□□□ -1.172e-6■■□□□ 14.1
LARP4Q71RC2 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.182e-18■■□□□ 14.1
LARP4Q71RC2 AKR1C1-205ENST00000477661 2637 ntTSL 57.37□□□□□ -1.232e-18■■□□□ 14.1
LARP4Q71RC2 TKT-204ENST00000450814 1941 ntTSL 217.41■□□□□ 0.384e-15■■□□□ 14
LARP4Q71RC2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.5■□□□□ 0.074e-15■■□□□ 14
LARP4Q71RC2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.86□□□□□ -0.034e-15■■□□□ 14
LARP4Q71RC2 TKT-210ENST00000469678 1871 ntTSL 514.84□□□□□ -0.034e-15■■□□□ 14
LARP4Q71RC2 TKT-207ENST00000461139 1972 ntTSL 212.74□□□□□ -0.374e-15■■□□□ 14
LARP4Q71RC2 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.464e-15■■□□□ 14
LARP4Q71RC2 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.554e-15■■□□□ 14
LARP4Q71RC2 TKT-206ENST00000460343 7286 ntTSL 211.04□□□□□ -0.644e-15■■□□□ 14
LARP4Q71RC2 COX7B-202ENST00000475465 685 ntTSL 28.27□□□□□ -1.091e-7■■□□□ 14
LARP4Q71RC2 AKR7A2-204ENST00000489286 725 ntTSL 518.53■□□□□ 0.569e-8■■□□□ 14
LARP4Q71RC2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.33e-20■■□□□ 14
LARP4Q71RC2 EZH2-210ENST00000498186 1876 ntTSL 224.22■■□□□ 1.471e-8■■□□□ 14
LARP4Q71RC2 EZH2-207ENST00000483012 1491 ntTSL 224.15■■□□□ 1.461e-8■■□□□ 14
LARP4Q71RC2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.71■■□□□ 1.391e-8■■□□□ 14
LARP4Q71RC2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.383e-20■■□□□ 14
LARP4Q71RC2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.261e-8■■□□□ 14
LARP4Q71RC2 CDK11B-202ENST00000341028 881 ntTSL 221.2■□□□□ 0.981e-8■■□□□ 14
LARP4Q71RC2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.791e-8■■□□□ 14
LARP4Q71RC2 CDK11B-206ENST00000615951 2227 ntTSL 1 (best)18.51■□□□□ 0.551e-8■■□□□ 14
LARP4Q71RC2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.55e-7■■□□□ 14
LARP4Q71RC2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.02■□□□□ 0.321e-8■■□□□ 14
LARP4Q71RC2 EZH2-209ENST00000492143 3641 ntTSL 216.59■□□□□ 0.251e-8■■□□□ 14
LARP4Q71RC2 CDK11B-205ENST00000611150 2350 ntTSL 1 (best)16.53■□□□□ 0.241e-8■■□□□ 14
LARP4Q71RC2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.31■□□□□ 0.21e-8■■□□□ 14
LARP4Q71RC2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.31■□□□□ 0.21e-8■■□□□ 14
LARP4Q71RC2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.25■□□□□ 0.191e-8■■□□□ 14
LARP4Q71RC2 PPIL2-207ENST00000462188 1735 ntTSL 216.06■□□□□ 0.161e-8■■□□□ 14
LARP4Q71RC2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.8■□□□□ 0.121e-8■■□□□ 14
LARP4Q71RC2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.071e-8■■□□□ 14
LARP4Q71RC2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.35■□□□□ 0.051e-8■■□□□ 14
LARP4Q71RC2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.031e-8■■□□□ 14
LARP4Q71RC2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -01e-8■■□□□ 14
LARP4Q71RC2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.051e-8■■□□□ 14
LARP4Q71RC2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.061e-8■■□□□ 14
LARP4Q71RC2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-8■■□□□ 14
LARP4Q71RC2 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)14.54□□□□□ -0.081e-8■■□□□ 14
LARP4Q71RC2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.161e-8■■□□□ 14
LARP4Q71RC2 PHF3-204ENST00000481385 2787 ntTSL 214.05□□□□□ -0.161e-8■■□□□ 14
LARP4Q71RC2 PHF3-212ENST00000515594 3074 ntTSL 212.94□□□□□ -0.341e-8■■□□□ 14
LARP4Q71RC2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.351e-8■■□□□ 14
LARP4Q71RC2 PHF3-205ENST00000494284 2854 ntTSL 212.32□□□□□ -0.441e-8■■□□□ 14
LARP4Q71RC2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.471e-8■■□□□ 14
LARP4Q71RC2 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.561e-8■■□□□ 14
LARP4Q71RC2 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.591e-8■■□□□ 14
LARP4Q71RC2 PPIL2-204ENST00000417788 4213 ntTSL 29.75□□□□□ -0.851e-8■■□□□ 14
LARP4Q71RC2 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.861e-8■■□□□ 14
LARP4Q71RC2 HOXB7-203ENST00000567101 528 ntTSL 29.56□□□□□ -0.881e-8■■□□□ 14
LARP4Q71RC2 PHF3-208ENST00000506783 3700 ntTSL 1 (best)9.44□□□□□ -0.91e-8■■□□□ 14
LARP4Q71RC2 KDELR2-202ENST00000382267 583 ntTSL 49.44□□□□□ -0.91e-8■■□□□ 14
LARP4Q71RC2 KDELR2-205ENST00000463747 376 ntTSL 59.43□□□□□ -0.91e-8■■□□□ 14
LARP4Q71RC2 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.911e-8■■□□□ 14
LARP4Q71RC2 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC9.11□□□□□ -0.951e-8■■□□□ 14
LARP4Q71RC2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.69□□□□□ -1.021e-8■■□□□ 14
LARP4Q71RC2 ZNF655-224ENST00000494357 4886 ntTSL 28.25□□□□□ -1.091e-8■■□□□ 14
LARP4Q71RC2 BLMH-206ENST00000578795 2079 nt7.91□□□□□ -1.141e-8■■□□□ 14
LARP4Q71RC2 ZNF655-207ENST00000419215 4346 ntTSL 1 (best)7.86□□□□□ -1.151e-8■■□□□ 14
LARP4Q71RC2 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.85□□□□□ -1.151e-8■■□□□ 14
LARP4Q71RC2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.211e-8■■□□□ 14
LARP4Q71RC2 KDELR2-204ENST00000462052 382 ntTSL 27.22□□□□□ -1.251e-8■■□□□ 14
LARP4Q71RC2 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.261e-8■■□□□ 14
LARP4Q71RC2 PHF3-211ENST00000514822 486 ntTSL 46.63□□□□□ -1.351e-8■■□□□ 14
LARP4Q71RC2 PHF3-210ENST00000509876 7124 ntTSL 1 (best)4.89□□□□□ -1.631e-8■■□□□ 14
LARP4Q71RC2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.911e-8■■□□□ 14
LARP4Q71RC2 SND1-212ENST00000485871 597 ntTSL 310.87□□□□□ -0.679e-8■■□□□ 14
LARP4Q71RC2 FMC1-205ENST00000488886 432 ntTSL 313.42□□□□□ -0.267e-8■■□□□ 14
LARP4Q71RC2 FMC1-203ENST00000481123 460 ntTSL 213.1□□□□□ -0.317e-8■■□□□ 14
LARP4Q71RC2 FMC1-202ENST00000468383 345 ntTSL 312.92□□□□□ -0.347e-8■■□□□ 14
LARP4Q71RC2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.367e-8■■□□□ 14
LARP4Q71RC2 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.66□□□□□ -0.387e-8■■□□□ 14
LARP4Q71RC2 FMC1-204ENST00000482181 386 ntTSL 211.49□□□□□ -0.577e-8■■□□□ 14
LARP4Q71RC2 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.847e-8■■□□□ 14
LARP4Q71RC2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.031e-12■■□□□ 14
LARP4Q71RC2 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.94□□□□□ -0.181e-12■■□□□ 14
LARP4Q71RC2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.537e-8■■□□□ 14
LARP4Q71RC2 PPP1CA-204ENST00000526510 1677 ntTSL 1 (best)19.31■□□□□ 0.687e-8■■□□□ 14
LARP4Q71RC2 PPP1CA-208ENST00000532446 1465 ntTSL 517.14■□□□□ 0.337e-8■■□□□ 14
LARP4Q71RC2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.287e-8■■□□□ 14
LARP4Q71RC2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.222e-7■■□□□ 14
LARP4Q71RC2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.574e-6■■□□□ 14
LARP4Q71RC2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.964e-6■■□□□ 14
Retrieved 100 of 15,922 protein–RNA pairs in 214.9 ms