RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
CDK11B-205ENST00000611150 PELP1Q8IZL8 1130 aaKnown RBP30.93■■■□□ 2.54
CDK11B-205ENST00000611150 MYT1Q01538 1121 aa30.37■■■□□ 2.45
CDK11B-205ENST00000611150 HRCP23327 699 aa29.17■■■□□ 2.26
CDK11B-205ENST00000611150 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
CDK11B-205ENST00000611150 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
CDK11B-205ENST00000611150 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
CDK11B-205ENST00000611150 PRKCSHP14314 528 aaPredicted RBP28■■■□□ 2.07
CDK11B-205ENST00000611150 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
CDK11B-205ENST00000611150 BCL11AQ9H165 835 aa27.77■■■□□ 2.04
CDK11B-205ENST00000611150 ERICH6Q7L0X2 663 aa27.65■■■□□ 2.02
CDK11B-205ENST00000611150 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
CDK11B-205ENST00000611150 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
CDK11B-205ENST00000611150 ABCC9O60706 1549 aa27.4■■□□□ 1.98
CDK11B-205ENST00000611150 CENPBP07199 599 aaPredicted RBP27.38■■□□□ 1.97
CDK11B-205ENST00000611150 APLP2Q06481 763 aa27.36■■□□□ 1.97
CDK11B-205ENST00000611150 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
CDK11B-205ENST00000611150 GTF3C3Q9Y5Q9 886 aa27.11■■□□□ 1.93
CDK11B-205ENST00000611150 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
CDK11B-205ENST00000611150 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
CDK11B-205ENST00000611150 ANP32EQ9BTT0 268 aa26.74■■□□□ 1.87
CDK11B-205ENST00000611150 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CDK11B-205ENST00000611150 SLC24A1O60721 1099 aa26.53■■□□□ 1.84
CDK11B-205ENST00000611150 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
CDK11B-205ENST00000611150 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
CDK11B-205ENST00000611150 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
CDK11B-205ENST00000611150 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
CDK11B-205ENST00000611150 NACADO15069 1562 aa26.18■■□□□ 1.78
CDK11B-205ENST00000611150 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
CDK11B-205ENST00000611150 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
CDK11B-205ENST00000611150 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.74
CDK11B-205ENST00000611150 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
CDK11B-205ENST00000611150 EIF5BO60841 1220 aaKnown RBP25.81■■□□□ 1.72
CDK11B-205ENST00000611150 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
CDK11B-205ENST00000611150 ANO8Q9HCE9 1232 aaPredicted RBP25.77■■□□□ 1.72
CDK11B-205ENST00000611150 TSHZ2Q9NRE2 1034 aa25.75■■□□□ 1.71
CDK11B-205ENST00000611150 UBE2Q2Q8WVN8 375 aa25.75■■□□□ 1.71
CDK11B-205ENST00000611150 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
CDK11B-205ENST00000611150 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
CDK11B-205ENST00000611150 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
CDK11B-205ENST00000611150 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
CDK11B-205ENST00000611150 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
CDK11B-205ENST00000611150 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
CDK11B-205ENST00000611150 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
CDK11B-205ENST00000611150 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
CDK11B-205ENST00000611150 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
CDK11B-205ENST00000611150 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
CDK11B-205ENST00000611150 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
CDK11B-205ENST00000611150 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
CDK11B-205ENST00000611150 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CDK11B-205ENST00000611150 SALL2Q9Y467 1007 aaPredicted RBP25.27■■□□□ 1.64
CDK11B-205ENST00000611150 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
CDK11B-205ENST00000611150 PKNOX2Q96KN3 472 aa25.12■■□□□ 1.61
CDK11B-205ENST00000611150 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
CDK11B-205ENST00000611150 CCDC136Q96JN2 1154 aa25.11■■□□□ 1.61
CDK11B-205ENST00000611150 PLEKHG5O94827 1062 aa25.09■■□□□ 1.61
CDK11B-205ENST00000611150 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
CDK11B-205ENST00000611150 DEKP35659 375 aaKnown RBP25.04■■□□□ 1.6
CDK11B-205ENST00000611150 RBM19Q9Y4C8 960 aaKnown RBP25.02■■□□□ 1.6
CDK11B-205ENST00000611150 MIER1Q8N108 512 aa25.01■■□□□ 1.59
CDK11B-205ENST00000611150 PODXL2Q9NZ53 605 aa24.98■■□□□ 1.59
CDK11B-205ENST00000611150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
CDK11B-205ENST00000611150 MSH5O43196 834 aa24.87■■□□□ 1.57
CDK11B-205ENST00000611150 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
CDK11B-205ENST00000611150 CC2D2AQ9P2K1 1620 aa24.78■■□□□ 1.56
CDK11B-205ENST00000611150 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.74■■□□□ 1.55
CDK11B-205ENST00000611150 FANCIQ9NVI1 1328 aa24.71■■□□□ 1.55
CDK11B-205ENST00000611150 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
CDK11B-205ENST00000611150 BCANQ96GW7 911 aa24.5■■□□□ 1.51
CDK11B-205ENST00000611150 IL27Q8NEV9 243 aa24.45■■□□□ 1.5
CDK11B-205ENST00000611150 NEFLP07196 543 aa24.42■■□□□ 1.5
CDK11B-205ENST00000611150 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.5
CDK11B-205ENST00000611150 GLIPR1L2Q4G1C9 344 aa24.39■■□□□ 1.49
CDK11B-205ENST00000611150 FKBP8Q14318 412 aa24.37■■□□□ 1.49
CDK11B-205ENST00000611150 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
CDK11B-205ENST00000611150 ZMYND15Q9H091 742 aa24.2■■□□□ 1.46
CDK11B-205ENST00000611150 NBR1Q14596 966 aa24.19■■□□□ 1.46
CDK11B-205ENST00000611150 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
CDK11B-205ENST00000611150 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
CDK11B-205ENST00000611150 RTL5Q5HYW3 569 aaPredicted RBP24.15■■□□□ 1.46
CDK11B-205ENST00000611150 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.45
CDK11B-205ENST00000611150 ITGAEP38570 1179 aa24.13■■□□□ 1.45
CDK11B-205ENST00000611150 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
CDK11B-205ENST00000611150 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
CDK11B-205ENST00000611150 NOP58Q9Y2X3 529 aaKnown RBP24.07■■□□□ 1.44
CDK11B-205ENST00000611150 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
CDK11B-205ENST00000611150 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
CDK11B-205ENST00000611150 PDE4CQ08493 712 aa24.03■■□□□ 1.44
CDK11B-205ENST00000611150 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
CDK11B-205ENST00000611150 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
CDK11B-205ENST00000611150 C11orf95C9JLR9 678 aaPredicted RBP23.99■■□□□ 1.43
CDK11B-205ENST00000611150 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
CDK11B-205ENST00000611150 FGD1P98174 961 aa23.95■■□□□ 1.43
CDK11B-205ENST00000611150 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
CDK11B-205ENST00000611150 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
CDK11B-205ENST00000611150 PDIA4P13667 645 aaKnown RBP23.92■■□□□ 1.42
CDK11B-205ENST00000611150 A0A0U1RQG5 324 aaPredicted RBP23.86■■□□□ 1.41
CDK11B-205ENST00000611150 AAMPQ13685 434 aa23.82■■□□□ 1.4
CDK11B-205ENST00000611150 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
CDK11B-205ENST00000611150 RBM10P98175 930 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms