Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.8□□□□□ -0.68
SEC61GP60059 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
SEC61GP60059 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.8□□□□□ -0.68
SEC61GP60059 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.8□□□□□ -0.68
SEC61GP60059 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 AL391121.1-201ENST00000607967 1349 ntBASIC10.8□□□□□ -0.68
SEC61GP60059 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC10.8□□□□□ -0.68
SEC61GP60059 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SEC61GP60059 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SEC61GP60059 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SEC61GP60059 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.79□□□□□ -0.68
SEC61GP60059 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC10.79□□□□□ -0.68
SEC61GP60059 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.79□□□□□ -0.68
SEC61GP60059 KC6-207ENST00000600644 2311 ntTSL 3 BASIC10.79□□□□□ -0.68
SEC61GP60059 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.79□□□□□ -0.68
SEC61GP60059 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 AP002365.1-201ENST00000603448 772 ntBASIC10.79□□□□□ -0.68
SEC61GP60059 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 AC073869.1-201ENST00000415574 2762 ntBASIC10.79□□□□□ -0.68
SEC61GP60059 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.79□□□□□ -0.68
SEC61GP60059 AC087741.3-201ENST00000624270 1347 ntBASIC10.79□□□□□ -0.68
SEC61GP60059 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.79□□□□□ -0.68
SEC61GP60059 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SEC61GP60059 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SEC61GP60059 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SEC61GP60059 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
SEC61GP60059 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SEC61GP60059 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC10.78□□□□□ -0.68
SEC61GP60059 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.78□□□□□ -0.68
SEC61GP60059 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.78□□□□□ -0.68
SEC61GP60059 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SEC61GP60059 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SEC61GP60059 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms