Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.25■□□□□ 0.83
SCNN1AP37088 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 AP002982.1-201ENST00000492365 877 ntBASIC20.25■□□□□ 0.83
SCNN1AP37088 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.25■□□□□ 0.83
SCNN1AP37088 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.25■□□□□ 0.83
SCNN1AP37088 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.25■□□□□ 0.83
SCNN1AP37088 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.25■□□□□ 0.83
SCNN1AP37088 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 AF186192.3-201ENST00000583427 947 ntBASIC20.25■□□□□ 0.83
SCNN1AP37088 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.25■□□□□ 0.83
SCNN1AP37088 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 AC116562.4-201ENST00000641316 2276 ntBASIC20.25■□□□□ 0.83
SCNN1AP37088 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.25■□□□□ 0.83
SCNN1AP37088 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCNN1AP37088 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.24■□□□□ 0.83
SCNN1AP37088 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.24■□□□□ 0.83
SCNN1AP37088 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SCNN1AP37088 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.24■□□□□ 0.83
SCNN1AP37088 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.24■□□□□ 0.83
SCNN1AP37088 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.24■□□□□ 0.83
SCNN1AP37088 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 AC073195.1-201ENST00000607241 877 ntBASIC20.24■□□□□ 0.83
SCNN1AP37088 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SCNN1AP37088 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCNN1AP37088 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCNN1AP37088 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.23■□□□□ 0.83
SCNN1AP37088 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.23■□□□□ 0.83
SCNN1AP37088 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
SCNN1AP37088 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.23■□□□□ 0.83
SCNN1AP37088 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SCNN1AP37088 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.23■□□□□ 0.83
SCNN1AP37088 SDHAP1-207ENST00000440850 2000 ntBASIC20.23■□□□□ 0.83
SCNN1AP37088 AL158047.1-201ENST00000445918 881 ntBASIC20.23■□□□□ 0.83
SCNN1AP37088 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.23■□□□□ 0.83
SCNN1AP37088 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.23■□□□□ 0.83
SCNN1AP37088 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.23■□□□□ 0.83
SCNN1AP37088 AL032819.2-201ENST00000624543 2162 ntBASIC20.23■□□□□ 0.83
SCNN1AP37088 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.23■□□□□ 0.83
SCNN1AP37088 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCNN1AP37088 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SCNN1AP37088 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.22■□□□□ 0.83
SCNN1AP37088 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 AC012618.2-201ENST00000428058 849 ntBASIC20.22■□□□□ 0.83
SCNN1AP37088 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 AC026271.3-201ENST00000571884 352 ntBASIC20.22■□□□□ 0.83
SCNN1AP37088 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.22■□□□□ 0.83
SCNN1AP37088 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SCNN1AP37088 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.22■□□□□ 0.83
SCNN1AP37088 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.22■□□□□ 0.83
SCNN1AP37088 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCNN1AP37088 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCNN1AP37088 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SCNN1AP37088 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.21■□□□□ 0.83
SCNN1AP37088 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
SCNN1AP37088 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCNN1AP37088 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SCNN1AP37088 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCNN1AP37088 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SCNN1AP37088 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCNN1AP37088 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCNN1AP37088 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms