Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-6■■■■□ 23.1
U2AF2P26368 PSME4-206ENST00000476586 1422 ntTSL 1 (best)7.51□□□□□ -1.211e-9■■■■□ 23.1
U2AF2P26368 PSME4-204ENST00000466539 548 ntTSL 47.11□□□□□ -1.271e-9■■■■□ 23.1
U2AF2P26368 DICER1-207ENST00000529206 1286 ntTSL 524.38■■□□□ 1.494e-11■■■■□ 23.1
U2AF2P26368 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.16■□□□□ 0.184e-11■■■■□ 23.1
U2AF2P26368 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.064e-11■■■■□ 23.1
U2AF2P26368 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.124e-11■■■■□ 23.1
U2AF2P26368 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.34e-11■■■■□ 23.1
U2AF2P26368 NFIA-211ENST00000482020 552 ntTSL 35.88□□□□□ -1.475e-6■■■■□ 23.1
U2AF2P26368 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.51□□□□□ -1.534e-11■■■■□ 23.1
U2AF2P26368 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.784e-11■■■■□ 23.1
U2AF2P26368 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.511e-7■■■■□ 23.1
U2AF2P26368 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC10.99□□□□□ -0.651e-7■■■■□ 23.1
U2AF2P26368 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.7□□□□□ -0.861e-7■■■■□ 23.1
U2AF2P26368 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.65□□□□□ -1.181e-7■■■■□ 23.1
U2AF2P26368 SOX5-201ENST00000367206 1816 ntTSL 27.61□□□□□ -1.191e-7■■■■□ 23.1
U2AF2P26368 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC9.47□□□□□ -0.894e-9■■■■□ 23.1
U2AF2P26368 SRRM1-222ENST00000596378 2314 ntTSL 1 (best)26.28■■□□□ 1.81e-9■■■■□ 23.1
U2AF2P26368 SRRM1-207ENST00000468822 768 ntTSL 216.75■□□□□ 0.272e-9■■■■□ 23.1
U2AF2P26368 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.041e-9■■■■□ 23.1
U2AF2P26368 SRRM1-212ENST00000479034 2671 ntTSL 58.18□□□□□ -1.11e-9■■■■□ 23.1
U2AF2P26368 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.421e-9■■■■□ 23.1
U2AF2P26368 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.471e-9■■■■□ 23.1
U2AF2P26368 HSPA8-220ENST00000533238 465 ntTSL 37.2□□□□□ -1.269e-11■■■■□ 23.1
U2AF2P26368 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC10.58□□□□□ -0.722e-8■■■■□ 23.1
U2AF2P26368 AC097478.1-201ENST00000506864 560 ntTSL 44.18□□□□□ -1.742e-8■■■■□ 23.1
U2AF2P26368 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.437e-7■■■■□ 23.1
U2AF2P26368 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC10.93□□□□□ -0.667e-7■■■■□ 23.1
U2AF2P26368 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC10.51□□□□□ -0.737e-7■■■■□ 23.1
U2AF2P26368 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.947e-7■■■■□ 23.1
U2AF2P26368 EFTUD2-211ENST00000588374 524 ntTSL 37.66□□□□□ -1.187e-7■■■■□ 23.1
U2AF2P26368 EFTUD2-225ENST00000593072 551 ntTSL 56.93□□□□□ -1.37e-7■■■■□ 23.1
U2AF2P26368 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC9.61□□□□□ -0.872e-7■■■■□ 23.1
U2AF2P26368 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.992e-7■■■■□ 23.1
U2AF2P26368 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.11■□□□□ 0.812e-9■■■■□ 23.1
U2AF2P26368 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-9■■■■□ 23.1
U2AF2P26368 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.072e-7■■■■□ 23.1
U2AF2P26368 ANAPC7-204ENST00000464697 734 ntTSL 313.12□□□□□ -0.312e-7■■■■□ 23.1
U2AF2P26368 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.312e-7■■■■□ 23.1
U2AF2P26368 ANAPC7-212ENST00000552170 579 ntTSL 411.61□□□□□ -0.552e-7■■■■□ 23.1
U2AF2P26368 ANAPC7-208ENST00000546720 772 ntTSL 28.94□□□□□ -0.982e-7■■■■□ 23.1
U2AF2P26368 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.97□□□□□ -1.452e-7■■■■□ 23.1
U2AF2P26368 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.863e-7■■■■□ 23.1
U2AF2P26368 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.133e-7■■■■□ 23.1
U2AF2P26368 SEC62-204ENST00000469515 785 ntTSL 36.74□□□□□ -1.333e-7■■■■□ 23.1
U2AF2P26368 SEC62-209ENST00000487736 508 ntTSL 52.72□□□□□ -1.972e-6■■■■□ 23.1
U2AF2P26368 SEC62-208ENST00000481435 627 ntTSL 22.61□□□□□ -1.992e-6■■■■□ 23.1
U2AF2P26368 SEC62-202ENST00000460513 641 ntTSL 52.45□□□□□ -2.022e-6■■■■□ 23.1
U2AF2P26368 ROCK2-201ENST00000261535 1795 ntTSL 525.84■■□□□ 1.734e-10■■■■□ 23.1
U2AF2P26368 ROCK2-204ENST00000431087 729 ntTSL 35.78□□□□□ -1.484e-10■■■■□ 23.1
U2AF2P26368 ROCK2-206ENST00000462366 563 ntTSL 33.58□□□□□ -1.844e-10■■■■□ 23.1
U2AF2P26368 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-7■■■■□ 23.1
U2AF2P26368 PIK3R4-202ENST00000504834 569 ntTSL 55.26□□□□□ -1.572e-7■■■■□ 23.1
U2AF2P26368 BCLAF1-208ENST00000528229 573 ntTSL 28.23□□□□□ -1.093e-6■■■■□ 23.1
U2AF2P26368 CLNS1A-206ENST00000526761 415 ntTSL 38.86□□□□□ -0.995e-7■■■■□ 23.1
U2AF2P26368 DVL2-208ENST00000575086 900 ntTSL 324.67■■□□□ 1.543e-10■■■■□ 23.1
U2AF2P26368 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.983e-10■■■■□ 23.1
U2AF2P26368 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.93e-10■■■■□ 23.1
U2AF2P26368 DVL2-213ENST00000576840 941 ntTSL 214.56□□□□□ -0.083e-10■■■■□ 23.1
U2AF2P26368 OSBPL9-219ENST00000528603 779 ntTSL 47.86□□□□□ -1.155e-7■■■■□ 23.1
U2AF2P26368 DMTF1-235ENST00000583751 177 ntTSL 32.37□□□□□ -2.032e-15■■■■□ 23.1
U2AF2P26368 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.69■■■□□ 2.661e-9■■■■□ 23
U2AF2P26368 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.25■■■□□ 2.271e-9■■■■□ 23
U2AF2P26368 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.941e-9■■■■□ 23
U2AF2P26368 EML3-207ENST00000460939 1770 ntTSL 526.68■■□□□ 1.861e-9■■■■□ 23
U2AF2P26368 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.39■■□□□ 1.821e-9■■■■□ 23
U2AF2P26368 AL121845.3-203ENST00000496820 507 ntTSL 525.44■■□□□ 1.661e-9■■■■□ 23
U2AF2P26368 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.4■■□□□ 1.667e-7■■■■□ 23
U2AF2P26368 LIME1-210ENST00000621325 2410 ntTSL 224.65■■□□□ 1.541e-9■■■■□ 23
U2AF2P26368 LIME1-203ENST00000465591 680 ntTSL 224.3■■□□□ 1.481e-9■■■■□ 23
U2AF2P26368 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 324.13■■□□□ 1.451e-9■■■■□ 23
U2AF2P26368 EML3-211ENST00000483199 1042 ntTSL 323.88■■□□□ 1.411e-9■■■■□ 23
U2AF2P26368 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 523.69■■□□□ 1.381e-9■■■■□ 23
U2AF2P26368 LIME1-207ENST00000489212 559 ntTSL 523.69■■□□□ 1.381e-9■■■■□ 23
U2AF2P26368 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.181e-9■■■■□ 23
U2AF2P26368 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.051e-9■■■■□ 23
U2AF2P26368 GRAMD1A-205ENST00000595596 881 ntTSL 221.17■□□□□ 0.981e-9■■■■□ 23
U2AF2P26368 SLC25A12-206ENST00000472748 630 ntTSL 320.21■□□□□ 0.831e-9■■■■□ 23
U2AF2P26368 PCSK6-208ENST00000559417 1035 ntTSL 520.12■□□□□ 0.811e-9■■■■□ 23
U2AF2P26368 LIME1-202ENST00000444951 451 ntAPPRIS ALT2 TSL 319.6■□□□□ 0.731e-9■■■■□ 23
U2AF2P26368 LIME1-208ENST00000493265 661 ntAPPRIS ALT2 TSL 219.6■□□□□ 0.731e-9■■■■□ 23
U2AF2P26368 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.697e-7■■■■□ 23
U2AF2P26368 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.87■□□□□ 0.611e-9■■■■□ 23
U2AF2P26368 LMBR1L-227ENST00000552577 2083 ntTSL 214.05□□□□□ -0.161e-9■■■■□ 23
U2AF2P26368 EML3-218ENST00000533165 524 ntTSL 313.52□□□□□ -0.251e-9■■■■□ 23
U2AF2P26368 GRAMD1A-209ENST00000598580 400 ntTSL 312.12□□□□□ -0.471e-9■■■■□ 23
U2AF2P26368 TRAP1-206ENST00000571538 587 ntTSL 411.37□□□□□ -0.591e-9■■■■□ 23
U2AF2P26368 NPIPB12-207ENST00000551448 910 ntTSL 39.68□□□□□ -0.861e-9■■■■□ 23
U2AF2P26368 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.887e-7■■■■□ 23
U2AF2P26368 NPIPB12-206ENST00000550690 675 ntTSL 58.12□□□□□ -1.111e-9■■■■□ 23
U2AF2P26368 SLC25A12-203ENST00000426896 911 ntTSL 27.85□□□□□ -1.151e-9■■■■□ 23
U2AF2P26368 NPIPB12-205ENST00000550665 1861 ntAPPRIS P1 TSL 56.16□□□□□ -1.421e-9■■■■□ 23
U2AF2P26368 CLYBL-207ENST00000443887 610 ntTSL 26.04□□□□□ -1.447e-7■■■■□ 23
U2AF2P26368 SPG11-211ENST00000558561 555 ntTSL 34.71□□□□□ -1.661e-9■■■■□ 23
U2AF2P26368 CLYBL-204ENST00000416504 712 ntTSL 34.48□□□□□ -1.697e-7■■■■□ 23
U2AF2P26368 SLC25A12-207ENST00000475360 829 ntTSL 54.38□□□□□ -1.711e-9■■■■□ 23
U2AF2P26368 SPG11-225ENST00000561391 629 ntTSL 33.47□□□□□ -1.851e-9■■■■□ 23
U2AF2P26368 SS18-209ENST00000578595 406 ntTSL 321.84■■□□□ 1.092e-7■■■■□ 23
U2AF2P26368 SS18-223ENST00000583595 375 ntTSL 34.95□□□□□ -1.622e-7■■■■□ 23
U2AF2P26368 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.084e-7■■■■□ 23
Retrieved 100 of 36,523 protein–RNA pairs in 221.8 ms