RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
SRRM1-202ENST00000374389 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
SRRM1-202ENST00000374389 NISCHQ9Y2I1 1504 aa11.32□□□□□ -0.6
SRRM1-202ENST00000374389 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
SRRM1-202ENST00000374389 SENP3Q9H4L4 574 aaPredicted RBP10.57□□□□□ -0.72
SRRM1-202ENST00000374389 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
SRRM1-202ENST00000374389 FOXD1Q16676 465 aa10.12□□□□□ -0.79
SRRM1-202ENST00000374389 SHROOM4Q9ULL8 1493 aa9.62□□□□□ -0.87
SRRM1-202ENST00000374389 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
SRRM1-202ENST00000374389 MSH5O43196 834 aa9.58□□□□□ -0.88
SRRM1-202ENST00000374389 ZCCHC6Q5VYS8 1495 aaKnown RBP9.58□□□□□ -0.88
SRRM1-202ENST00000374389 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
SRRM1-202ENST00000374389 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
SRRM1-202ENST00000374389 ADRA2BP18089 450 aa9.45□□□□□ -0.9
SRRM1-202ENST00000374389 SUPT5HO00267 1087 aaKnown RBP9.39□□□□□ -0.91
SRRM1-202ENST00000374389 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
SRRM1-202ENST00000374389 PIAS4Q8N2W9 510 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-202ENST00000374389 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.92
SRRM1-202ENST00000374389 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
SRRM1-202ENST00000374389 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
SRRM1-202ENST00000374389 ABCC9O60706 1549 aa9.02□□□□□ -0.97
SRRM1-202ENST00000374389 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
SRRM1-202ENST00000374389 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
SRRM1-202ENST00000374389 NACADO15069 1562 aa8.9□□□□□ -0.98
SRRM1-202ENST00000374389 CECR2Q9BXF3 1484 aa8.86□□□□□ -0.99
SRRM1-202ENST00000374389 LOC105371045A0A1W2PR82 267 aa8.85□□□□□ -0.99
SRRM1-202ENST00000374389 RB1CC1Q8TDY2 1594 aa8.85□□□□□ -0.99
SRRM1-202ENST00000374389 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
SRRM1-202ENST00000374389 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
SRRM1-202ENST00000374389 SLC24A1O60721 1099 aa8.78□□□□□ -1
SRRM1-202ENST00000374389 PCGF6Q9BYE7 350 aa8.77□□□□□ -1.01
SRRM1-202ENST00000374389 WIZO95785 1651 aa8.74□□□□□ -1.01
SRRM1-202ENST00000374389 HRCP23327 699 aa8.74□□□□□ -1.01
SRRM1-202ENST00000374389 TRIM41Q8WV44 630 aa8.73□□□□□ -1.01
SRRM1-202ENST00000374389 MAPK8IP2Q13387 824 aaPredicted RBP8.7□□□□□ -1.02
SRRM1-202ENST00000374389 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-202ENST00000374389 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-202ENST00000374389 EIF4G1Q04637 1599 aaKnown RBP8.64□□□□□ -1.03
SRRM1-202ENST00000374389 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
SRRM1-202ENST00000374389 SMARCA4P51532 1647 aa8.62□□□□□ -1.03
SRRM1-202ENST00000374389 EHMT2Q96KQ7 1210 aa8.61□□□□□ -1.03
SRRM1-202ENST00000374389 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
SRRM1-202ENST00000374389 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
SRRM1-202ENST00000374389 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
SRRM1-202ENST00000374389 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
SRRM1-202ENST00000374389 CCDC88BA6NC98 1476 aa8.58□□□□□ -1.04
SRRM1-202ENST00000374389 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
SRRM1-202ENST00000374389 SMARCA2P51531 1590 aa8.56□□□□□ -1.04
SRRM1-202ENST00000374389 DNAJC5BQ9UF47 199 aa8.56□□□□□ -1.04
SRRM1-202ENST00000374389 ABCC8Q09428 1581 aa8.54□□□□□ -1.04
SRRM1-202ENST00000374389 POTEHQ6S545 545 aa8.47□□□□□ -1.05
SRRM1-202ENST00000374389 SOGA1O94964 1423 aa8.47□□□□□ -1.05
SRRM1-202ENST00000374389 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.06
SRRM1-202ENST00000374389 RUSC2Q8N2Y8 1516 aa8.43□□□□□ -1.06
SRRM1-202ENST00000374389 ATAD2BQ9ULI0 1458 aa8.43□□□□□ -1.06
SRRM1-202ENST00000374389 WRNQ14191 1432 aaPredicted RBP eCLIP8.39□□□□□ -1.07
SRRM1-202ENST00000374389 PPP4R3CPQ6ZMV5 832 aa8.39□□□□□ -1.07
SRRM1-202ENST00000374389 CEP162Q5TB80 1403 aa8.38□□□□□ -1.07
SRRM1-202ENST00000374389 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
SRRM1-202ENST00000374389 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
SRRM1-202ENST00000374389 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
SRRM1-202ENST00000374389 TNIKQ9UKE5 1360 aa8.36□□□□□ -1.07
SRRM1-202ENST00000374389 EEA1Q15075 1411 aa8.36□□□□□ -1.07
SRRM1-202ENST00000374389 DMRT2Q9Y5R5 561 aa8.36□□□□□ -1.07
SRRM1-202ENST00000374389 DCAF8L1A6NGE4 600 aa8.34□□□□□ -1.07
SRRM1-202ENST00000374389 ZEB1P37275 1124 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-202ENST00000374389 SCAF1Q9H7N4 1312 aaKnown RBP8.33□□□□□ -1.08
SRRM1-202ENST00000374389 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
SRRM1-202ENST00000374389 GOLGA3Q08378 1498 aa8.32□□□□□ -1.08
SRRM1-202ENST00000374389 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
SRRM1-202ENST00000374389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-202ENST00000374389 PRKCSHP14314 528 aaPredicted RBP8.28□□□□□ -1.08
SRRM1-202ENST00000374389 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
SRRM1-202ENST00000374389 NCAPD3P42695 1498 aa8.26□□□□□ -1.09
SRRM1-202ENST00000374389 KIF21BO75037 1637 aa8.26□□□□□ -1.09
SRRM1-202ENST00000374389 MYT1Q01538 1121 aa8.26□□□□□ -1.09
SRRM1-202ENST00000374389 RAPGEF2Q9Y4G8 1499 aa8.26□□□□□ -1.09
SRRM1-202ENST00000374389 HMGXB3Q12766 1538 aa8.25□□□□□ -1.09
SRRM1-202ENST00000374389 TOP2BQ02880 1626 aa8.25□□□□□ -1.09
SRRM1-202ENST00000374389 PELP1Q8IZL8 1130 aaKnown RBP8.24□□□□□ -1.09
SRRM1-202ENST00000374389 CLIP1P30622 1438 aa8.23□□□□□ -1.09
SRRM1-202ENST00000374389 CCER1Q8TC90 406 aaPredicted RBP8.23□□□□□ -1.09
SRRM1-202ENST00000374389 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.09
SRRM1-202ENST00000374389 CUX1P39880 1505 aa8.2□□□□□ -1.1
SRRM1-202ENST00000374389 VPS8Q8N3P4 1428 aa8.19□□□□□ -1.1
SRRM1-202ENST00000374389 CFTRP13569 1480 aa8.19□□□□□ -1.1
SRRM1-202ENST00000374389 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-202ENST00000374389 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
SRRM1-202ENST00000374389 PRXQ9BXM0 1461 aa8.18□□□□□ -1.1
SRRM1-202ENST00000374389 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
SRRM1-202ENST00000374389 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
SRRM1-202ENST00000374389 HNRNPUL2Q1KMD3 747 aaKnown RBP8.12□□□□□ -1.11
SRRM1-202ENST00000374389 KIF27Q86VH2 1401 aa8.12□□□□□ -1.11
SRRM1-202ENST00000374389 CNKSR2Q8WXI2 1034 aa8.12□□□□□ -1.11
SRRM1-202ENST00000374389 DAXXQ9UER7 740 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-202ENST00000374389 CUX2O14529 1486 aa8.11□□□□□ -1.11
SRRM1-202ENST00000374389 APLP2Q06481 763 aa8.1□□□□□ -1.11
SRRM1-202ENST00000374389 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
SRRM1-202ENST00000374389 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-202ENST00000374389 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms