RNA–Protein interactions for RNA: ENST00000550690.1

NPIPB12-206, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 5

Gene NPIPB12, Length 675 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-206ENST00000550690 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
NPIPB12-206ENST00000550690 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
NPIPB12-206ENST00000550690 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
NPIPB12-206ENST00000550690 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
NPIPB12-206ENST00000550690 POTEDQ86YR6 584 aa15.29■□□□□ 0.04
NPIPB12-206ENST00000550690 NISCHQ9Y2I1 1504 aa15.25■□□□□ 0.03
NPIPB12-206ENST00000550690 FOXD1Q16676 465 aa15.16■□□□□ 0.02
NPIPB12-206ENST00000550690 MSH5O43196 834 aa14.48□□□□□ -0.09
NPIPB12-206ENST00000550690 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
NPIPB12-206ENST00000550690 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
NPIPB12-206ENST00000550690 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
NPIPB12-206ENST00000550690 ADRA2BP18089 450 aa13.77□□□□□ -0.21
NPIPB12-206ENST00000550690 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.3
NPIPB12-206ENST00000550690 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
NPIPB12-206ENST00000550690 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
NPIPB12-206ENST00000550690 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
NPIPB12-206ENST00000550690 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
NPIPB12-206ENST00000550690 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
NPIPB12-206ENST00000550690 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
NPIPB12-206ENST00000550690 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
NPIPB12-206ENST00000550690 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
NPIPB12-206ENST00000550690 ABCC9O60706 1549 aa12.55□□□□□ -0.4
NPIPB12-206ENST00000550690 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
NPIPB12-206ENST00000550690 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
NPIPB12-206ENST00000550690 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
NPIPB12-206ENST00000550690 NACADO15069 1562 aa12.26□□□□□ -0.45
NPIPB12-206ENST00000550690 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
NPIPB12-206ENST00000550690 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
NPIPB12-206ENST00000550690 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
NPIPB12-206ENST00000550690 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
NPIPB12-206ENST00000550690 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
NPIPB12-206ENST00000550690 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
NPIPB12-206ENST00000550690 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
NPIPB12-206ENST00000550690 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
NPIPB12-206ENST00000550690 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
NPIPB12-206ENST00000550690 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
NPIPB12-206ENST00000550690 POTEHQ6S545 545 aa11.86□□□□□ -0.51
NPIPB12-206ENST00000550690 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
NPIPB12-206ENST00000550690 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
NPIPB12-206ENST00000550690 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
NPIPB12-206ENST00000550690 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
NPIPB12-206ENST00000550690 DNAJC5BQ9UF47 199 aa11.68□□□□□ -0.54
NPIPB12-206ENST00000550690 WIZO95785 1651 aa11.68□□□□□ -0.54
NPIPB12-206ENST00000550690 SMARCA4P51532 1647 aa11.67□□□□□ -0.54
NPIPB12-206ENST00000550690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPIPB12-206ENST00000550690 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
NPIPB12-206ENST00000550690 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
NPIPB12-206ENST00000550690 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
NPIPB12-206ENST00000550690 PEG3Q9GZU2 1588 aa11.51□□□□□ -0.57
NPIPB12-206ENST00000550690 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
NPIPB12-206ENST00000550690 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
NPIPB12-206ENST00000550690 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
NPIPB12-206ENST00000550690 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
NPIPB12-206ENST00000550690 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
NPIPB12-206ENST00000550690 ATAD2BQ9ULI0 1458 aa11.42□□□□□ -0.58
NPIPB12-206ENST00000550690 BAZ1BQ9UIG0 1483 aaKnown RBP11.4□□□□□ -0.58
NPIPB12-206ENST00000550690 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
NPIPB12-206ENST00000550690 CAPN15O75808 1086 aa11.35□□□□□ -0.59
NPIPB12-206ENST00000550690 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
NPIPB12-206ENST00000550690 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
NPIPB12-206ENST00000550690 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
NPIPB12-206ENST00000550690 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
NPIPB12-206ENST00000550690 DSG3P32926 999 aa11.26□□□□□ -0.61
NPIPB12-206ENST00000550690 SPINK5Q9NQ38 1064 aaPredicted RBP11.26□□□□□ -0.61
NPIPB12-206ENST00000550690 EEA1Q15075 1411 aa11.25□□□□□ -0.61
NPIPB12-206ENST00000550690 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
NPIPB12-206ENST00000550690 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
NPIPB12-206ENST00000550690 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
NPIPB12-206ENST00000550690 PCGF6Q9BYE7 350 aa11.14□□□□□ -0.63
NPIPB12-206ENST00000550690 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
NPIPB12-206ENST00000550690 SOGA1O94964 1423 aa11.13□□□□□ -0.63
NPIPB12-206ENST00000550690 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
NPIPB12-206ENST00000550690 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
NPIPB12-206ENST00000550690 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
NPIPB12-206ENST00000550690 CFTRP13569 1480 aa11.11□□□□□ -0.63
NPIPB12-206ENST00000550690 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
NPIPB12-206ENST00000550690 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
NPIPB12-206ENST00000550690 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
NPIPB12-206ENST00000550690 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
NPIPB12-206ENST00000550690 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
NPIPB12-206ENST00000550690 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
NPIPB12-206ENST00000550690 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
NPIPB12-206ENST00000550690 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
NPIPB12-206ENST00000550690 ABCB7O75027 752 aa11.04□□□□□ -0.64
NPIPB12-206ENST00000550690 KIF21BO75037 1637 aa11.04□□□□□ -0.64
NPIPB12-206ENST00000550690 HRCP23327 699 aa11.03□□□□□ -0.64
NPIPB12-206ENST00000550690 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
NPIPB12-206ENST00000550690 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
NPIPB12-206ENST00000550690 UBTFP17480 764 aaKnown RBP11.02□□□□□ -0.65
NPIPB12-206ENST00000550690 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
NPIPB12-206ENST00000550690 CUX1P39880 1505 aa11□□□□□ -0.65
NPIPB12-206ENST00000550690 APLP2Q06481 763 aa10.97□□□□□ -0.65
NPIPB12-206ENST00000550690 KIF27Q86VH2 1401 aa10.96□□□□□ -0.65
NPIPB12-206ENST00000550690 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
NPIPB12-206ENST00000550690 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
NPIPB12-206ENST00000550690 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
NPIPB12-206ENST00000550690 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
NPIPB12-206ENST00000550690 PRXQ9BXM0 1461 aa10.9□□□□□ -0.66
NPIPB12-206ENST00000550690 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.66
NPIPB12-206ENST00000550690 CLIP1P30622 1438 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms