RNA–Protein interactions for RNA: ENST00000476586.5

PSME4-206, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 1,422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-206ENST00000476586 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
PSME4-206ENST00000476586 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
PSME4-206ENST00000476586 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
PSME4-206ENST00000476586 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
PSME4-206ENST00000476586 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
PSME4-206ENST00000476586 FOXD1Q16676 465 aa18.38■□□□□ 0.53
PSME4-206ENST00000476586 ADRA2BP18089 450 aa17.89■□□□□ 0.45
PSME4-206ENST00000476586 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
PSME4-206ENST00000476586 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
PSME4-206ENST00000476586 MSH5O43196 834 aa16.87■□□□□ 0.29
PSME4-206ENST00000476586 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
PSME4-206ENST00000476586 KCNA4P22459 653 aa16.48■□□□□ 0.23
PSME4-206ENST00000476586 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
PSME4-206ENST00000476586 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.19
PSME4-206ENST00000476586 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
PSME4-206ENST00000476586 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
PSME4-206ENST00000476586 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
PSME4-206ENST00000476586 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
PSME4-206ENST00000476586 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
PSME4-206ENST00000476586 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
PSME4-206ENST00000476586 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
PSME4-206ENST00000476586 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
PSME4-206ENST00000476586 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
PSME4-206ENST00000476586 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
PSME4-206ENST00000476586 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
PSME4-206ENST00000476586 ZBTB22O15209 634 aa15.14■□□□□ 0.01
PSME4-206ENST00000476586 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
PSME4-206ENST00000476586 SLC4A2P04920 1241 aa15.03■□□□□ -0
PSME4-206ENST00000476586 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
PSME4-206ENST00000476586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
PSME4-206ENST00000476586 MYCNP04198 464 aaPredicted RBP14.79□□□□□ -0.04
PSME4-206ENST00000476586 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
PSME4-206ENST00000476586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
PSME4-206ENST00000476586 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
PSME4-206ENST00000476586 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.08
PSME4-206ENST00000476586 ATXN8OSP0DMR3 200 aa14.51□□□□□ -0.09
PSME4-206ENST00000476586 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
PSME4-206ENST00000476586 APLP2Q06481 763 aa14.39□□□□□ -0.11
PSME4-206ENST00000476586 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
PSME4-206ENST00000476586 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
PSME4-206ENST00000476586 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
PSME4-206ENST00000476586 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
PSME4-206ENST00000476586 CAPN15O75808 1086 aa14.21□□□□□ -0.13
PSME4-206ENST00000476586 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
PSME4-206ENST00000476586 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
PSME4-206ENST00000476586 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
PSME4-206ENST00000476586 ABCB7O75027 752 aa13.98□□□□□ -0.17
PSME4-206ENST00000476586 POLA2Q14181 598 aa13.98□□□□□ -0.17
PSME4-206ENST00000476586 DSG3P32926 999 aa13.84□□□□□ -0.19
PSME4-206ENST00000476586 FKBP8Q14318 412 aa13.81□□□□□ -0.2
PSME4-206ENST00000476586 FBLN2P98095 1184 aa13.81□□□□□ -0.2
PSME4-206ENST00000476586 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
PSME4-206ENST00000476586 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
PSME4-206ENST00000476586 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
PSME4-206ENST00000476586 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
PSME4-206ENST00000476586 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
PSME4-206ENST00000476586 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
PSME4-206ENST00000476586 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
PSME4-206ENST00000476586 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
PSME4-206ENST00000476586 PROM2Q8N271 834 aa13.28□□□□□ -0.28
PSME4-206ENST00000476586 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PSME4-206ENST00000476586 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
PSME4-206ENST00000476586 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSME4-206ENST00000476586 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.3
PSME4-206ENST00000476586 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
PSME4-206ENST00000476586 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
PSME4-206ENST00000476586 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
PSME4-206ENST00000476586 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
PSME4-206ENST00000476586 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.34
PSME4-206ENST00000476586 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
PSME4-206ENST00000476586 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
PSME4-206ENST00000476586 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
PSME4-206ENST00000476586 MIER1Q8N108 512 aa12.89□□□□□ -0.35
PSME4-206ENST00000476586 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
PSME4-206ENST00000476586 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
PSME4-206ENST00000476586 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
PSME4-206ENST00000476586 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
PSME4-206ENST00000476586 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
PSME4-206ENST00000476586 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
PSME4-206ENST00000476586 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
PSME4-206ENST00000476586 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
PSME4-206ENST00000476586 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
PSME4-206ENST00000476586 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
PSME4-206ENST00000476586 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
PSME4-206ENST00000476586 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
PSME4-206ENST00000476586 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
PSME4-206ENST00000476586 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
PSME4-206ENST00000476586 PKD2Q13563 968 aa12.51□□□□□ -0.41
PSME4-206ENST00000476586 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
PSME4-206ENST00000476586 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■□□□ 11.9
PSME4-206ENST00000476586 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
PSME4-206ENST00000476586 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
PSME4-206ENST00000476586 NUBP1P53384 320 aa12.46□□□□□ -0.41
PSME4-206ENST00000476586 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
PSME4-206ENST00000476586 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
PSME4-206ENST00000476586 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
PSME4-206ENST00000476586 GSE1Q14687 1217 aa12.42□□□□□ -0.42
PSME4-206ENST00000476586 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
PSME4-206ENST00000476586 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
PSME4-206ENST00000476586 CCDC180Q9P1Z9 1646 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms