RNA–Protein interactions for RNA: ENST00000482020.1

NFIA-211, Transcript of nuclear factor I A, humanhuman

TSL 3

Gene NFIA, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-211ENST00000482020 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
NFIA-211ENST00000482020 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
NFIA-211ENST00000482020 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
NFIA-211ENST00000482020 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
NFIA-211ENST00000482020 FOXD1Q16676 465 aa15.92■□□□□ 0.14
NFIA-211ENST00000482020 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
NFIA-211ENST00000482020 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
NFIA-211ENST00000482020 ADRA2BP18089 450 aa15.23■□□□□ 0.03
NFIA-211ENST00000482020 PIAS4Q8N2W9 510 aaPredicted RBP14.99□□□□□ -0.01
NFIA-211ENST00000482020 MSH5O43196 834 aa14.73□□□□□ -0.05
NFIA-211ENST00000482020 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
NFIA-211ENST00000482020 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
NFIA-211ENST00000482020 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
NFIA-211ENST00000482020 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
NFIA-211ENST00000482020 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
NFIA-211ENST00000482020 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
NFIA-211ENST00000482020 KCNA4P22459 653 aa13.57□□□□□ -0.24
NFIA-211ENST00000482020 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
NFIA-211ENST00000482020 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
NFIA-211ENST00000482020 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
NFIA-211ENST00000482020 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
NFIA-211ENST00000482020 NISCHQ9Y2I1 1504 aa13.15□□□□□ -0.3
NFIA-211ENST00000482020 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
NFIA-211ENST00000482020 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
NFIA-211ENST00000482020 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
NFIA-211ENST00000482020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.373e-9■■■■■ 30.7
NFIA-211ENST00000482020 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
NFIA-211ENST00000482020 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
NFIA-211ENST00000482020 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
NFIA-211ENST00000482020 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
NFIA-211ENST00000482020 ZBTB22O15209 634 aa12.48□□□□□ -0.41
NFIA-211ENST00000482020 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
NFIA-211ENST00000482020 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
NFIA-211ENST00000482020 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
NFIA-211ENST00000482020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
NFIA-211ENST00000482020 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
NFIA-211ENST00000482020 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
NFIA-211ENST00000482020 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
NFIA-211ENST00000482020 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
NFIA-211ENST00000482020 APLP2Q06481 763 aa12.24□□□□□ -0.45
NFIA-211ENST00000482020 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
NFIA-211ENST00000482020 CAPN15O75808 1086 aa12.14□□□□□ -0.47
NFIA-211ENST00000482020 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
NFIA-211ENST00000482020 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
NFIA-211ENST00000482020 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
NFIA-211ENST00000482020 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
NFIA-211ENST00000482020 DSG3P32926 999 aa11.96□□□□□ -0.49
NFIA-211ENST00000482020 ABCB7O75027 752 aa11.89□□□□□ -0.51
NFIA-211ENST00000482020 POLA2Q14181 598 aa11.85□□□□□ -0.51
NFIA-211ENST00000482020 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
NFIA-211ENST00000482020 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
NFIA-211ENST00000482020 ABCC9O60706 1549 aa11.64□□□□□ -0.55
NFIA-211ENST00000482020 FBLN2P98095 1184 aa11.57□□□□□ -0.56
NFIA-211ENST00000482020 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
NFIA-211ENST00000482020 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
NFIA-211ENST00000482020 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
NFIA-211ENST00000482020 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
NFIA-211ENST00000482020 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
NFIA-211ENST00000482020 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
NFIA-211ENST00000482020 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
NFIA-211ENST00000482020 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
NFIA-211ENST00000482020 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
NFIA-211ENST00000482020 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
NFIA-211ENST00000482020 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
NFIA-211ENST00000482020 FKBP8Q14318 412 aa11.16□□□□□ -0.62
NFIA-211ENST00000482020 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
NFIA-211ENST00000482020 NACADO15069 1562 aa11.12□□□□□ -0.63
NFIA-211ENST00000482020 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
NFIA-211ENST00000482020 PROM2Q8N271 834 aa11.05□□□□□ -0.64
NFIA-211ENST00000482020 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
NFIA-211ENST00000482020 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
NFIA-211ENST00000482020 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
NFIA-211ENST00000482020 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
NFIA-211ENST00000482020 CHRDL2Q6WN34 429 aa10.97□□□□□ -0.65
NFIA-211ENST00000482020 CLEC11AQ9Y240 323 aa10.97□□□□□ -0.65
NFIA-211ENST00000482020 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
NFIA-211ENST00000482020 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
NFIA-211ENST00000482020 UNC13AQ9UPW8 1703 aa10.91□□□□□ -0.66
NFIA-211ENST00000482020 DCAF1Q9Y4B6 1507 aa10.9□□□□□ -0.66
NFIA-211ENST00000482020 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
NFIA-211ENST00000482020 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
NFIA-211ENST00000482020 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
NFIA-211ENST00000482020 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
NFIA-211ENST00000482020 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
NFIA-211ENST00000482020 SHROOM4Q9ULL8 1493 aa10.74□□□□□ -0.69
NFIA-211ENST00000482020 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
NFIA-211ENST00000482020 POTEHQ6S545 545 aa10.72□□□□□ -0.69
NFIA-211ENST00000482020 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
NFIA-211ENST00000482020 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
NFIA-211ENST00000482020 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
NFIA-211ENST00000482020 MIER1Q8N108 512 aa10.67□□□□□ -0.7
NFIA-211ENST00000482020 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.7
NFIA-211ENST00000482020 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
NFIA-211ENST00000482020 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
NFIA-211ENST00000482020 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
NFIA-211ENST00000482020 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
NFIA-211ENST00000482020 EIF4G1Q04637 1599 aaKnown RBP10.55□□□□□ -0.72
NFIA-211ENST00000482020 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
NFIA-211ENST00000482020 ZBTB47Q9UFB7 747 aaPredicted RBP10.54□□□□□ -0.72
NFIA-211ENST00000482020 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms