RNA–Protein interactions for RNA: ENST00000504834.1

PIK3R4-202, Transcript of phosphoinositide-3-kinase regulatory subunit 4, humanhuman

TSL 5

Gene PIK3R4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R4-202ENST00000504834 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
PIK3R4-202ENST00000504834 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
PIK3R4-202ENST00000504834 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
PIK3R4-202ENST00000504834 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
PIK3R4-202ENST00000504834 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
PIK3R4-202ENST00000504834 FOXD1Q16676 465 aa12.8□□□□□ -0.36
PIK3R4-202ENST00000504834 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
PIK3R4-202ENST00000504834 MSH5O43196 834 aa12.05□□□□□ -0.48
PIK3R4-202ENST00000504834 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
PIK3R4-202ENST00000504834 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
PIK3R4-202ENST00000504834 ADRA2BP18089 450 aa11.45□□□□□ -0.58
PIK3R4-202ENST00000504834 ABCC9O60706 1549 aa11.23□□□□□ -0.61
PIK3R4-202ENST00000504834 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
PIK3R4-202ENST00000504834 CCDC180Q9P1Z9 1646 aa11.13□□□□□ -0.63
PIK3R4-202ENST00000504834 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
PIK3R4-202ENST00000504834 MAPK8IP2Q13387 824 aaPredicted RBP10.74□□□□□ -0.69
PIK3R4-202ENST00000504834 DMRT2Q9Y5R5 561 aa10.68□□□□□ -0.7
PIK3R4-202ENST00000504834 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
PIK3R4-202ENST00000504834 DNAJC5BQ9UF47 199 aa10.61□□□□□ -0.71
PIK3R4-202ENST00000504834 NACADO15069 1562 aa10.56□□□□□ -0.72
PIK3R4-202ENST00000504834 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
PIK3R4-202ENST00000504834 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
PIK3R4-202ENST00000504834 UNC13AQ9UPW8 1703 aa10.4□□□□□ -0.74
PIK3R4-202ENST00000504834 MYO15BQ96JP2 1530 aa10.36□□□□□ -0.75
PIK3R4-202ENST00000504834 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
PIK3R4-202ENST00000504834 BICRAQ9NZM4 1560 aa10.31□□□□□ -0.76
PIK3R4-202ENST00000504834 SCAF1Q9H7N4 1312 aaKnown RBP10.25□□□□□ -0.77
PIK3R4-202ENST00000504834 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
PIK3R4-202ENST00000504834 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
PIK3R4-202ENST00000504834 ZCCHC6Q5VYS8 1495 aaKnown RBP10.18□□□□□ -0.78
PIK3R4-202ENST00000504834 DCAF8L1A6NGE4 600 aa10.18□□□□□ -0.78
PIK3R4-202ENST00000504834 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.79
PIK3R4-202ENST00000504834 CECR2Q9BXF3 1484 aa10.13□□□□□ -0.79
PIK3R4-202ENST00000504834 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
PIK3R4-202ENST00000504834 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
PIK3R4-202ENST00000504834 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
PIK3R4-202ENST00000504834 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
PIK3R4-202ENST00000504834 POTEHQ6S545 545 aa9.97□□□□□ -0.81
PIK3R4-202ENST00000504834 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
PIK3R4-202ENST00000504834 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
PIK3R4-202ENST00000504834 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
PIK3R4-202ENST00000504834 CUX2O14529 1486 aa9.75□□□□□ -0.85
PIK3R4-202ENST00000504834 NCAPD3P42695 1498 aa9.73□□□□□ -0.85
PIK3R4-202ENST00000504834 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
PIK3R4-202ENST00000504834 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
PIK3R4-202ENST00000504834 ATAD2BQ9ULI0 1458 aa9.69□□□□□ -0.86
PIK3R4-202ENST00000504834 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
PIK3R4-202ENST00000504834 SMARCA4P51532 1647 aa9.65□□□□□ -0.86
PIK3R4-202ENST00000504834 HMGXB3Q12766 1538 aa9.65□□□□□ -0.86
PIK3R4-202ENST00000504834 NESP48681 1621 aa9.6□□□□□ -0.87
PIK3R4-202ENST00000504834 BAZ1BQ9UIG0 1483 aaKnown RBP9.59□□□□□ -0.87
PIK3R4-202ENST00000504834 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
PIK3R4-202ENST00000504834 PEG3Q9GZU2 1588 aa9.54□□□□□ -0.88
PIK3R4-202ENST00000504834 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
PIK3R4-202ENST00000504834 THOC2Q8NI27 1593 aaKnown RBP9.53□□□□□ -0.88
PIK3R4-202ENST00000504834 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
PIK3R4-202ENST00000504834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.49□□□□□ -0.89
PIK3R4-202ENST00000504834 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
PIK3R4-202ENST00000504834 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
PIK3R4-202ENST00000504834 DSG3P32926 999 aa9.48□□□□□ -0.89
PIK3R4-202ENST00000504834 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
PIK3R4-202ENST00000504834 SPINK5Q9NQ38 1064 aaPredicted RBP9.41□□□□□ -0.9
PIK3R4-202ENST00000504834 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.9
PIK3R4-202ENST00000504834 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
PIK3R4-202ENST00000504834 WDR62O43379 1518 aa9.38□□□□□ -0.91
PIK3R4-202ENST00000504834 WIZO95785 1651 aa9.38□□□□□ -0.91
PIK3R4-202ENST00000504834 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
PIK3R4-202ENST00000504834 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
PIK3R4-202ENST00000504834 FANCD2Q9BXW9 1451 aa9.33□□□□□ -0.92
PIK3R4-202ENST00000504834 CAPN15O75808 1086 aa9.3□□□□□ -0.92
PIK3R4-202ENST00000504834 CFTRP13569 1480 aa9.29□□□□□ -0.92
PIK3R4-202ENST00000504834 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
PIK3R4-202ENST00000504834 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
PIK3R4-202ENST00000504834 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
PIK3R4-202ENST00000504834 URB2Q14146 1524 aaKnown RBP9.24□□□□□ -0.93
PIK3R4-202ENST00000504834 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
PIK3R4-202ENST00000504834 IFT140Q96RY7 1462 aa9.17□□□□□ -0.94
PIK3R4-202ENST00000504834 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
PIK3R4-202ENST00000504834 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
PIK3R4-202ENST00000504834 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
PIK3R4-202ENST00000504834 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.94
PIK3R4-202ENST00000504834 ABCC8Q09428 1581 aa9.14□□□□□ -0.95
PIK3R4-202ENST00000504834 TOPBP1Q92547 1522 aa9.14□□□□□ -0.95
PIK3R4-202ENST00000504834 ZNF608Q9ULD9 1512 aaPredicted RBP9.14□□□□□ -0.95
PIK3R4-202ENST00000504834 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
PIK3R4-202ENST00000504834 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
PIK3R4-202ENST00000504834 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
PIK3R4-202ENST00000504834 EIF4G3O43432 1585 aaKnown RBP9.09□□□□□ -0.95
PIK3R4-202ENST00000504834 ABCB7O75027 752 aa9.09□□□□□ -0.95
PIK3R4-202ENST00000504834 NCBP3Q53F19 620 aaKnown RBP9.08□□□□□ -0.96
PIK3R4-202ENST00000504834 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
PIK3R4-202ENST00000504834 CHD1O14646 1710 aa9.06□□□□□ -0.96
PIK3R4-202ENST00000504834 AQRO60306 1485 aaKnown RBP eCLIP9.06□□□□□ -0.96
PIK3R4-202ENST00000504834 FBLN2P98095 1184 aa9.05□□□□□ -0.96
PIK3R4-202ENST00000504834 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
PIK3R4-202ENST00000504834 TARBP1Q13395 1621 aaKnown RBP9.05□□□□□ -0.96
PIK3R4-202ENST00000504834 SP7Q8TDD2 431 aaPredicted RBP9.04□□□□□ -0.96
PIK3R4-202ENST00000504834 TRHP20396 242 aaPredicted RBP9.03□□□□□ -0.96
PIK3R4-202ENST00000504834 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.96
PIK3R4-202ENST00000504834 SOGA1O94964 1423 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms