Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.173e-22■■■■□ 21.7
RPS3P23396 DHCR7-210ENST00000533800 837 ntTSL 315.19■□□□□ 0.023e-15■■■■□ 21.7
RPS3P23396 DHCR7-203ENST00000525137 996 ntTSL 314.73□□□□□ -0.053e-15■■■■□ 21.7
RPS3P23396 DHCR7-212ENST00000534795 979 ntTSL 1 (best)13.23□□□□□ -0.293e-15■■■■□ 21.7
RPS3P23396 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.49■□□□□ 0.071e-6■■■■□ 21.7
RPS3P23396 UPF1-210ENST00000600689 3084 ntTSL 217.51■□□□□ 0.393e-6■■■■□ 21.7
RPS3P23396 UPF1-204ENST00000596842 3825 ntTSL 214.69□□□□□ -0.063e-6■■■■□ 21.7
RPS3P23396 TMEM43-202ENST00000432444 908 ntTSL 315.75■□□□□ 0.118e-7■■■■□ 21.7
RPS3P23396 GSTO1-206ENST00000493946 874 ntTSL 212.59□□□□□ -0.392e-8■■■■□ 21.7
RPS3P23396 RBBP4-212ENST00000482190 616 ntTSL 33.33□□□□□ -1.881e-6■■■■□ 21.7
RPS3P23396 SDHD-208ENST00000534010 460 ntTSL 210.5□□□□□ -0.733e-8■■■■□ 21.7
RPS3P23396 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.294e-6■■■■□ 21.7
RPS3P23396 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.13□□□□□ -0.314e-6■■■■□ 21.7
RPS3P23396 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.85□□□□□ -0.354e-6■■■■□ 21.7
RPS3P23396 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.594e-6■■■■□ 21.7
RPS3P23396 RPN1-206ENST00000495462 566 ntTSL 36.14□□□□□ -1.432e-7■■■■□ 21.7
RPS3P23396 KRT18-203ENST00000546656 521 ntTSL 213.45□□□□□ -0.262e-7■■■■□ 21.6
RPS3P23396 PGD-202ENST00000460189 767 ntTSL 212.62□□□□□ -0.392e-7■■■■□ 21.6
RPS3P23396 CHD4-204ENST00000535810 607 ntTSL 28.56□□□□□ -1.045e-6■■■■□ 21.6
RPS3P23396 TAGLN2-204ENST00000397334 801 ntTSL 518.54■□□□□ 0.566e-7■■■■□ 21.6
RPS3P23396 TTR-204ENST00000610404 1040 ntTSL 5 BASIC8.2□□□□□ -1.13e-9■■■■□ 21.6
RPS3P23396 TTR-205ENST00000613781 556 ntTSL 5 BASIC8.2□□□□□ -1.13e-9■■■■□ 21.6
RPS3P23396 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.273e-9■■■■□ 21.6
RPS3P23396 HNRNPM-207ENST00000597081 1004 ntTSL 519.5■□□□□ 0.713e-11■■■■□ 21.6
RPS3P23396 MCM7-212ENST00000493352 533 ntTSL 212.84□□□□□ -0.353e-13■■■■□ 21.6
RPS3P23396 POLR2C-208ENST00000567982 1135 ntTSL 211.51□□□□□ -0.571e-6■■■■□ 21.6
RPS3P23396 AMN-205ENST00000559507 435 ntTSL 324.64■■□□□ 1.545e-8■■■■□ 21.6
RPS3P23396 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.31■□□□□ 0.521e-6■■■■□ 21.6
RPS3P23396 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.361e-6■■■■□ 21.6
RPS3P23396 DOCK6-209ENST00000588429 566 ntTSL 412.37□□□□□ -0.436e-6■■■■□ 21.6
RPS3P23396 XYLT2-202ENST00000376550 3267 ntTSL 1 (best)12.13□□□□□ -0.471e-6■■■■□ 21.6
RPS3P23396 EXT2-201ENST00000343631 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.542e-6■■■■□ 21.6
RPS3P23396 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.566e-6■■■■□ 21.6
RPS3P23396 DOCK6-207ENST00000587656 4009 ntTSL 511.08□□□□□ -0.646e-6■■■■□ 21.6
RPS3P23396 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC10.06□□□□□ -0.82e-6■■■■□ 21.6
RPS3P23396 APP-212ENST00000463070 582 ntTSL 27.92□□□□□ -1.141e-7■■■■□ 21.6
RPS3P23396 APP-217ENST00000548570 361 ntTSL 24.93□□□□□ -1.621e-7■■■■□ 21.6
RPS3P23396 SERPINF1-204ENST00000571149 431 ntTSL 316.13■□□□□ 0.171e-23■■■■□ 21.6
RPS3P23396 LMAN2-207ENST00000514458 616 ntTSL 520.06■□□□□ 0.82e-7■■■■□ 21.6
RPS3P23396 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.24e-7■■■■□ 21.6
RPS3P23396 ELOVL5-204ENST00000465983 696 ntTSL 312.35□□□□□ -0.433e-7■■■■□ 21.6
RPS3P23396 ELOVL5-206ENST00000486973 794 ntTSL 312.15□□□□□ -0.463e-7■■■■□ 21.6
RPS3P23396 ELOVL5-205ENST00000485336 761 ntTSL 58.63□□□□□ -1.033e-7■■■■□ 21.6
RPS3P23396 DKK1-202ENST00000467359 547 ntTSL 210.91□□□□□ -0.666e-7■■■■□ 21.6
RPS3P23396 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.296e-7■■■■□ 21.6
RPS3P23396 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.8■□□□□ 0.126e-7■■■■□ 21.6
RPS3P23396 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.316e-7■■■■□ 21.6
RPS3P23396 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.99□□□□□ -0.336e-7■■■■□ 21.6
RPS3P23396 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.211e-7■■■■□ 21.6
RPS3P23396 PLD3-211ENST00000485448 1308 ntTSL 1 (best)16.82■□□□□ 0.284e-8■■■■□ 21.6
RPS3P23396 PLD3-202ENST00000359274 745 ntTSL 314.99□□□□□ -0.014e-8■■■■□ 21.6
RPS3P23396 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.341e-7■■■■□ 21.5
RPS3P23396 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.951e-7■■■■□ 21.5
RPS3P23396 SCAMP2-208ENST00000566557 585 ntTSL 216.01■□□□□ 0.151e-7■■■■□ 21.5
RPS3P23396 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.082e-6■■■■□ 21.5
RPS3P23396 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.084e-7■■■■□ 21.5
RPS3P23396 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.13□□□□□ -0.472e-6■■■■□ 21.5
RPS3P23396 KHK-206ENST00000490823 1396 ntTSL 518.97■□□□□ 0.633e-6■■■■□ 21.5
RPS3P23396 KHK-204ENST00000464371 1042 ntTSL 1 (best)16.35■□□□□ 0.213e-6■■■■□ 21.5
RPS3P23396 KHK-203ENST00000429697 1303 ntTSL 516.2■□□□□ 0.183e-6■■■■□ 21.5
RPS3P23396 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.133e-6■■■■□ 21.5
RPS3P23396 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.033e-6■■■■□ 21.5
RPS3P23396 UBR4-206ENST00000419533 5583 ntTSL 58.09□□□□□ -1.111e-7■■■■□ 21.5
RPS3P23396 RARS-201ENST00000231572 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.736e-7■■■■□ 21.5
RPS3P23396 RARS-204ENST00000520013 1990 ntTSL 26.09□□□□□ -1.436e-7■■■■□ 21.5
RPS3P23396 UBL5-203ENST00000588141 573 ntTSL 420.61■□□□□ 0.893e-9■■■■□ 21.5
RPS3P23396 SDHB-203ENST00000466613 828 ntTSL 216.1■□□□□ 0.179e-7■■■■□ 21.5
RPS3P23396 STT3A-206ENST00000526213 555 ntTSL 24.43□□□□□ -1.74e-8■■■■□ 21.5
RPS3P23396 PLD3-224ENST00000602131 503 ntTSL 218.61■□□□□ 0.574e-8■■■■□ 21.5
RPS3P23396 PLD3-215ENST00000493006 694 ntTSL 217.72■□□□□ 0.434e-8■■■■□ 21.5
RPS3P23396 PLD3-203ENST00000392032 873 ntTSL 515.29■□□□□ 0.044e-8■■■■□ 21.5
RPS3P23396 PLD3-217ENST00000594908 804 ntTSL 315.18■□□□□ 0.024e-8■■■■□ 21.5
RPS3P23396 PLD3-218ENST00000596682 443 ntTSL 315.18■□□□□ 0.024e-8■■■■□ 21.5
RPS3P23396 PLD3-221ENST00000599685 544 ntTSL 212.87□□□□□ -0.354e-8■■■■□ 21.5
RPS3P23396 CDK1-206ENST00000487784 598 ntTSL 50.38□□□□□ -2.359e-18■■■■□ 21.5
RPS3P23396 ACADVL-226ENST00000581562 571 ntTSL 322.23■■□□□ 1.152e-6■■■■□ 21.5
RPS3P23396 ACADVL-229ENST00000582356 633 ntTSL 422.1■■□□□ 1.132e-6■■■■□ 21.5
RPS3P23396 ACADVL-233ENST00000583312 799 ntTSL 322.1■■□□□ 1.132e-6■■■■□ 21.5
RPS3P23396 ACADVL-208ENST00000577857 566 ntTSL 422.1■■□□□ 1.132e-6■■■■□ 21.5
RPS3P23396 ACADVL-217ENST00000579286 933 ntTSL 322.1■■□□□ 1.132e-6■■■■□ 21.5
RPS3P23396 ACADVL-210ENST00000578269 724 ntTSL 221.7■■□□□ 1.062e-6■■■■□ 21.5
RPS3P23396 ACADVL-212ENST00000578421 548 ntTSL 321.7■■□□□ 1.062e-6■■■■□ 21.5
RPS3P23396 ACADVL-238ENST00000584103 555 ntTSL 421.22■□□□□ 0.992e-6■■■■□ 21.5
RPS3P23396 ACADVL-223ENST00000580263 545 ntTSL 221.11■□□□□ 0.972e-6■■■■□ 21.5
RPS3P23396 ACADVL-221ENST00000579886 502 ntTSL 520.12■□□□□ 0.812e-6■■■■□ 21.5
RPS3P23396 ACADVL-227ENST00000582056 738 ntTSL 219.37■□□□□ 0.692e-6■■■■□ 21.5
RPS3P23396 ACADVL-206ENST00000577191 1212 ntTSL 219.08■□□□□ 0.642e-6■■■■□ 21.5
RPS3P23396 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.281e-8■■■■□ 21.5
RPS3P23396 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.221e-8■■■■□ 21.5
RPS3P23396 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.14□□□□□ -0.151e-8■■■■□ 21.5
RPS3P23396 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.68□□□□□ -1.021e-8■■■■□ 21.5
RPS3P23396 RAN-204ENST00000464211 562 ntTSL 58.13□□□□□ -1.111e-8■■■■□ 21.5
RPS3P23396 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.36□□□□□ -1.231e-8■■■■□ 21.5
RPS3P23396 RAN-203ENST00000448750 2455 ntTSL 26.49□□□□□ -1.371e-8■■■■□ 21.5
RPS3P23396 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.04■■□□□ 1.288e-7■■■■□ 21.5
RPS3P23396 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.188e-7■■■■□ 21.5
RPS3P23396 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.583e-15■■■■□ 21.5
RPS3P23396 UBB-209ENST00000614404 1056 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.793e-15■■■■□ 21.5
RPS3P23396 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.933e-15■■■■□ 21.5
RPS3P23396 GAR1-204ENST00000506840 831 ntTSL 219.28■□□□□ 0.681e-7■■■■□ 21.5
Retrieved 100 of 24,271 protein–RNA pairs in 203.3 ms