RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
RPN1-206ENST00000495462 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
RPN1-206ENST00000495462 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
RPN1-206ENST00000495462 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
RPN1-206ENST00000495462 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
RPN1-206ENST00000495462 FOXD1Q16676 465 aa15.7■□□□□ 0.1
RPN1-206ENST00000495462 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
RPN1-206ENST00000495462 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
RPN1-206ENST00000495462 ADRA2BP18089 450 aa14.86□□□□□ -0.03
RPN1-206ENST00000495462 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
RPN1-206ENST00000495462 MSH5O43196 834 aa14.6□□□□□ -0.07
RPN1-206ENST00000495462 ABCC9O60706 1549 aa14.6□□□□□ -0.07
RPN1-206ENST00000495462 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
RPN1-206ENST00000495462 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
RPN1-206ENST00000495462 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
RPN1-206ENST00000495462 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
RPN1-206ENST00000495462 NACADO15069 1562 aa13.73□□□□□ -0.21
RPN1-206ENST00000495462 DCAF8L2P0C7V8 631 aa13.72□□□□□ -0.21
RPN1-206ENST00000495462 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
RPN1-206ENST00000495462 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPN1-206ENST00000495462 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
RPN1-206ENST00000495462 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
RPN1-206ENST00000495462 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
RPN1-206ENST00000495462 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
RPN1-206ENST00000495462 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
RPN1-206ENST00000495462 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
RPN1-206ENST00000495462 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
RPN1-206ENST00000495462 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
RPN1-206ENST00000495462 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
RPN1-206ENST00000495462 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
RPN1-206ENST00000495462 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
RPN1-206ENST00000495462 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
RPN1-206ENST00000495462 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
RPN1-206ENST00000495462 EIF4G1Q04637 1599 aaKnown RBP13.13□□□□□ -0.31
RPN1-206ENST00000495462 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
RPN1-206ENST00000495462 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
RPN1-206ENST00000495462 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
RPN1-206ENST00000495462 KCNA4P22459 653 aa13□□□□□ -0.33
RPN1-206ENST00000495462 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
RPN1-206ENST00000495462 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
RPN1-206ENST00000495462 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
RPN1-206ENST00000495462 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
RPN1-206ENST00000495462 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
RPN1-206ENST00000495462 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
RPN1-206ENST00000495462 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
RPN1-206ENST00000495462 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
RPN1-206ENST00000495462 NESP48681 1621 aa12.57□□□□□ -0.4
RPN1-206ENST00000495462 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
RPN1-206ENST00000495462 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
RPN1-206ENST00000495462 PEG3Q9GZU2 1588 aa12.53□□□□□ -0.4
RPN1-206ENST00000495462 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
RPN1-206ENST00000495462 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
RPN1-206ENST00000495462 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
RPN1-206ENST00000495462 CUX2O14529 1486 aa12.48□□□□□ -0.41
RPN1-206ENST00000495462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPN1-206ENST00000495462 WIZO95785 1651 aa12.42□□□□□ -0.42
RPN1-206ENST00000495462 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
RPN1-206ENST00000495462 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
RPN1-206ENST00000495462 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
RPN1-206ENST00000495462 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
RPN1-206ENST00000495462 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
RPN1-206ENST00000495462 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
RPN1-206ENST00000495462 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
RPN1-206ENST00000495462 RSF1Q96T23 1441 aaPredicted RBP12.29□□□□□ -0.44
RPN1-206ENST00000495462 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
RPN1-206ENST00000495462 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
RPN1-206ENST00000495462 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
RPN1-206ENST00000495462 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
RPN1-206ENST00000495462 WDR62O43379 1518 aa12.21□□□□□ -0.46
RPN1-206ENST00000495462 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
RPN1-206ENST00000495462 CFTRP13569 1480 aa12.19□□□□□ -0.46
RPN1-206ENST00000495462 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
RPN1-206ENST00000495462 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
RPN1-206ENST00000495462 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
RPN1-206ENST00000495462 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
RPN1-206ENST00000495462 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
RPN1-206ENST00000495462 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
RPN1-206ENST00000495462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
RPN1-206ENST00000495462 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
RPN1-206ENST00000495462 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
RPN1-206ENST00000495462 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
RPN1-206ENST00000495462 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
RPN1-206ENST00000495462 ZBTB22O15209 634 aa11.98□□□□□ -0.49
RPN1-206ENST00000495462 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
RPN1-206ENST00000495462 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
RPN1-206ENST00000495462 APLP2Q06481 763 aa11.95□□□□□ -0.5
RPN1-206ENST00000495462 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
RPN1-206ENST00000495462 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
RPN1-206ENST00000495462 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
RPN1-206ENST00000495462 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
RPN1-206ENST00000495462 CAPN15O75808 1086 aa11.89□□□□□ -0.51
RPN1-206ENST00000495462 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
RPN1-206ENST00000495462 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
RPN1-206ENST00000495462 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.517e-7■■■■□ 25.1
RPN1-206ENST00000495462 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
RPN1-206ENST00000495462 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
RPN1-206ENST00000495462 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
RPN1-206ENST00000495462 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
RPN1-206ENST00000495462 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
RPN1-206ENST00000495462 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms