Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN6O15212 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN6O15212 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.45■□□□□ 0.7
PFDN6O15212 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PFDN6O15212 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.45■□□□□ 0.7
PFDN6O15212 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN6O15212 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN6O15212 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.45■□□□□ 0.7
PFDN6O15212 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN6O15212 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PFDN6O15212 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 UNC93B5-201ENST00000530315 699 ntBASIC19.44■□□□□ 0.7
PFDN6O15212 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN6O15212 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.44■□□□□ 0.7
PFDN6O15212 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.44■□□□□ 0.7
PFDN6O15212 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN6O15212 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PFDN6O15212 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PFDN6O15212 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PFDN6O15212 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 POM121L13P-201ENST00000422362 380 ntBASIC19.43■□□□□ 0.7
PFDN6O15212 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.43■□□□□ 0.7
PFDN6O15212 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
PFDN6O15212 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.43■□□□□ 0.7
PFDN6O15212 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
PFDN6O15212 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN6O15212 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.43■□□□□ 0.7
PFDN6O15212 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.43■□□□□ 0.7
PFDN6O15212 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PFDN6O15212 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN6O15212 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN6O15212 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PFDN6O15212 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PFDN6O15212 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms