Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC068880.1-201ENST00000507289 2297 ntBASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC027612.3-201ENST00000413684 1047 ntBASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRDV1A0A1B0GX56 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 AL591742.1-201ENST00000604433 565 ntBASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 AL031432.3-201ENST00000607698 485 ntBASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRDV1A0A1B0GX56 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRDV1A0A1B0GX56 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.08■□□□□ 0.32
TRDV1A0A1B0GX56 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRDV1A0A1B0GX56 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms