Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV9-1A0A075B6T8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV9-1A0A075B6T8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV9-1A0A075B6T8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV9-1A0A075B6T8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAV9-1A0A075B6T8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV9-1A0A075B6T8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 LINC00896-202ENST00000609602 2128 ntBASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV9-1A0A075B6T8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 ATP5G2P3-201ENST00000429083 425 ntBASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 KRT125P-201ENST00000546827 989 ntBASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 AC124067.4-201ENST00000519691 2379 ntBASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 KRT16P2-201ENST00000414673 1423 ntBASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV9-1A0A075B6T8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms