Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CCDC162P-202ENST00000368966 6751 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GRHL3-204ENST00000361548 2869 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF558-201ENST00000301475 3014 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MAPK10-301ENST00000641313 2482 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC108215.1-201ENST00000624463 3226 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MAPK10-310ENST00000641384 2213 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MAPK10-382ENST00000642023 2369 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LILRB4-204ENST00000391736 4002 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC22A6-201ENST00000360421 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TRIM10-203ENST00000376704 3007 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TRMT10A-201ENST00000273962 3694 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LMX1A-201ENST00000294816 3350 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GOLT1A-201ENST00000308302 883 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-624P-201ENST00000363411 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-960P-201ENST00000364056 120 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-686P-201ENST00000364839 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA72.2-201ENST00000365028 127 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PGA4-201ENST00000378149 1748 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms