RNA–Protein interactions for RNA: ENST00000295269.4

SLC9A4-201, Transcript of solute carrier family 9 member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A4, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4-201ENST00000295269 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
SLC9A4-201ENST00000295269 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
SLC9A4-201ENST00000295269 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
SLC9A4-201ENST00000295269 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
SLC9A4-201ENST00000295269 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
SLC9A4-201ENST00000295269 ABCC9O60706 1549 aa12.74□□□□□ -0.37
SLC9A4-201ENST00000295269 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
SLC9A4-201ENST00000295269 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
SLC9A4-201ENST00000295269 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
SLC9A4-201ENST00000295269 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
SLC9A4-201ENST00000295269 NACADO15069 1562 aa12.33□□□□□ -0.44
SLC9A4-201ENST00000295269 RB1CC1Q8TDY2 1594 aa12.33□□□□□ -0.44
SLC9A4-201ENST00000295269 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
SLC9A4-201ENST00000295269 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
SLC9A4-201ENST00000295269 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
SLC9A4-201ENST00000295269 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
SLC9A4-201ENST00000295269 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
SLC9A4-201ENST00000295269 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
SLC9A4-201ENST00000295269 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
SLC9A4-201ENST00000295269 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
SLC9A4-201ENST00000295269 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
SLC9A4-201ENST00000295269 HRCP23327 699 aa11.96□□□□□ -0.5
SLC9A4-201ENST00000295269 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
SLC9A4-201ENST00000295269 YTHDC1Q96MU7 727 aaKnown RBP11.74□□□□□ -0.53
SLC9A4-201ENST00000295269 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SLC9A4-201ENST00000295269 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
SLC9A4-201ENST00000295269 RANGAP1P46060 587 aaPredicted RBP11.64□□□□□ -0.55
SLC9A4-201ENST00000295269 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
SLC9A4-201ENST00000295269 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.55
SLC9A4-201ENST00000295269 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
SLC9A4-201ENST00000295269 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
SLC9A4-201ENST00000295269 RSF1Q96T23 1441 aaPredicted RBP11.51□□□□□ -0.57
SLC9A4-201ENST00000295269 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
SLC9A4-201ENST00000295269 UNC13AQ9UPW8 1703 aa11.51□□□□□ -0.57
SLC9A4-201ENST00000295269 BAZ1BQ9UIG0 1483 aaKnown RBP11.49□□□□□ -0.57
SLC9A4-201ENST00000295269 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
SLC9A4-201ENST00000295269 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
SLC9A4-201ENST00000295269 SMARCA4P51532 1647 aa11.45□□□□□ -0.58
SLC9A4-201ENST00000295269 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
SLC9A4-201ENST00000295269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
SLC9A4-201ENST00000295269 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
SLC9A4-201ENST00000295269 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
SLC9A4-201ENST00000295269 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
SLC9A4-201ENST00000295269 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
SLC9A4-201ENST00000295269 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
SLC9A4-201ENST00000295269 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
SLC9A4-201ENST00000295269 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
SLC9A4-201ENST00000295269 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
SLC9A4-201ENST00000295269 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
SLC9A4-201ENST00000295269 HMGXB3Q12766 1538 aa11.27□□□□□ -0.6
SLC9A4-201ENST00000295269 WIZO95785 1651 aa11.27□□□□□ -0.61
SLC9A4-201ENST00000295269 MYT1Q01538 1121 aa11.25□□□□□ -0.61
SLC9A4-201ENST00000295269 APLP2Q06481 763 aa11.23□□□□□ -0.61
SLC9A4-201ENST00000295269 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
SLC9A4-201ENST00000295269 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
SLC9A4-201ENST00000295269 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.61
SLC9A4-201ENST00000295269 DNAJC5BQ9UF47 199 aa11.2□□□□□ -0.62
SLC9A4-201ENST00000295269 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
SLC9A4-201ENST00000295269 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
SLC9A4-201ENST00000295269 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
SLC9A4-201ENST00000295269 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
SLC9A4-201ENST00000295269 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
SLC9A4-201ENST00000295269 ITGAEP38570 1179 aa11.16□□□□□ -0.62
SLC9A4-201ENST00000295269 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
SLC9A4-201ENST00000295269 BCANQ96GW7 911 aa11.15□□□□□ -0.62
SLC9A4-201ENST00000295269 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
SLC9A4-201ENST00000295269 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
SLC9A4-201ENST00000295269 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
SLC9A4-201ENST00000295269 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.64
SLC9A4-201ENST00000295269 FOXD1Q16676 465 aa11.07□□□□□ -0.64
SLC9A4-201ENST00000295269 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
SLC9A4-201ENST00000295269 WRNQ14191 1432 aaPredicted RBP eCLIP11.03□□□□□ -0.64
SLC9A4-201ENST00000295269 CFTRP13569 1480 aa11.02□□□□□ -0.64
SLC9A4-201ENST00000295269 FANCD2Q9BXW9 1451 aa11.02□□□□□ -0.65
SLC9A4-201ENST00000295269 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
SLC9A4-201ENST00000295269 LAMC3Q9Y6N6 1575 aa11.01□□□□□ -0.65
SLC9A4-201ENST00000295269 NESP48681 1621 aa10.93□□□□□ -0.66
SLC9A4-201ENST00000295269 NEFLP07196 543 aa10.93□□□□□ -0.66
SLC9A4-201ENST00000295269 MRC2Q9UBG0 1479 aa10.91□□□□□ -0.66
SLC9A4-201ENST00000295269 EEA1Q15075 1411 aa10.88□□□□□ -0.67
SLC9A4-201ENST00000295269 FBLN2P98095 1184 aa10.88□□□□□ -0.67
SLC9A4-201ENST00000295269 KIF27Q86VH2 1401 aa10.88□□□□□ -0.67
SLC9A4-201ENST00000295269 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
SLC9A4-201ENST00000295269 POLR3GLQ9BT43 218 aa10.87□□□□□ -0.67
SLC9A4-201ENST00000295269 SOGA1O94964 1423 aa10.87□□□□□ -0.67
SLC9A4-201ENST00000295269 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
SLC9A4-201ENST00000295269 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
SLC9A4-201ENST00000295269 CUX2O14529 1486 aa10.81□□□□□ -0.68
SLC9A4-201ENST00000295269 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
SLC9A4-201ENST00000295269 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
SLC9A4-201ENST00000295269 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
SLC9A4-201ENST00000295269 FGD5Q6ZNL6 1462 aa10.78□□□□□ -0.68
SLC9A4-201ENST00000295269 MIER1Q8N108 512 aa10.78□□□□□ -0.68
SLC9A4-201ENST00000295269 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
SLC9A4-201ENST00000295269 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
SLC9A4-201ENST00000295269 TDRD9Q8NDG6 1382 aaKnown RBP10.75□□□□□ -0.69
SLC9A4-201ENST00000295269 TOP2BQ02880 1626 aa10.72□□□□□ -0.69
SLC9A4-201ENST00000295269 CUX1P39880 1505 aa10.72□□□□□ -0.69
SLC9A4-201ENST00000295269 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
SLC9A4-201ENST00000295269 SENP3-EIF4A1A0A087X0R7 540 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms