RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
RNF41-201ENST00000345093 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
RNF41-201ENST00000345093 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
RNF41-201ENST00000345093 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
RNF41-201ENST00000345093 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
RNF41-201ENST00000345093 APLP2Q06481 763 aa15.63■□□□□ 0.09
RNF41-201ENST00000345093 ABCC9O60706 1549 aa15.41■□□□□ 0.06
RNF41-201ENST00000345093 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
RNF41-201ENST00000345093 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
RNF41-201ENST00000345093 ATP1B4Q9UN42 357 aaPredicted RBP14.97□□□□□ -0.01
RNF41-201ENST00000345093 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.02
RNF41-201ENST00000345093 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
RNF41-201ENST00000345093 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
RNF41-201ENST00000345093 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
RNF41-201ENST00000345093 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
RNF41-201ENST00000345093 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
RNF41-201ENST00000345093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
RNF41-201ENST00000345093 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
RNF41-201ENST00000345093 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
RNF41-201ENST00000345093 NACADO15069 1562 aa14.69□□□□□ -0.06
RNF41-201ENST00000345093 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
RNF41-201ENST00000345093 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
RNF41-201ENST00000345093 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
RNF41-201ENST00000345093 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
RNF41-201ENST00000345093 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
RNF41-201ENST00000345093 FBLN2P98095 1184 aa14.5□□□□□ -0.09
RNF41-201ENST00000345093 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
RNF41-201ENST00000345093 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
RNF41-201ENST00000345093 HRCP23327 699 aa14.49□□□□□ -0.09
RNF41-201ENST00000345093 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
RNF41-201ENST00000345093 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
RNF41-201ENST00000345093 CDK11AQ9UQ88 783 aaPredicted RBP14.39□□□□□ -0.11
RNF41-201ENST00000345093 MYT1Q01538 1121 aa14.34□□□□□ -0.11
RNF41-201ENST00000345093 ESF1Q9H501 851 aaKnown RBP14.32□□□□□ -0.12
RNF41-201ENST00000345093 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
RNF41-201ENST00000345093 ERCC6Q03468 1493 aa14.27□□□□□ -0.13
RNF41-201ENST00000345093 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
RNF41-201ENST00000345093 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
RNF41-201ENST00000345093 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
RNF41-201ENST00000345093 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
RNF41-201ENST00000345093 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
RNF41-201ENST00000345093 ITGAEP38570 1179 aa14.04□□□□□ -0.16
RNF41-201ENST00000345093 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
RNF41-201ENST00000345093 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
RNF41-201ENST00000345093 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.16
RNF41-201ENST00000345093 PDS5BQ9NTI5 1447 aa14.01□□□□□ -0.17
RNF41-201ENST00000345093 BCANQ96GW7 911 aa14.01□□□□□ -0.17
RNF41-201ENST00000345093 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
RNF41-201ENST00000345093 TRIM52Q96A61 297 aa14□□□□□ -0.17
RNF41-201ENST00000345093 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.18
RNF41-201ENST00000345093 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
RNF41-201ENST00000345093 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
RNF41-201ENST00000345093 EEA1Q15075 1411 aa13.9□□□□□ -0.18
RNF41-201ENST00000345093 NEFLP07196 543 aa13.88□□□□□ -0.19
RNF41-201ENST00000345093 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
RNF41-201ENST00000345093 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
RNF41-201ENST00000345093 NEFMP07197 916 aa13.82□□□□□ -0.2
RNF41-201ENST00000345093 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RNF41-201ENST00000345093 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
RNF41-201ENST00000345093 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
RNF41-201ENST00000345093 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
RNF41-201ENST00000345093 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
RNF41-201ENST00000345093 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
RNF41-201ENST00000345093 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
RNF41-201ENST00000345093 WRNQ14191 1432 aaPredicted RBP eCLIP13.78□□□□□ -0.2
RNF41-201ENST00000345093 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
RNF41-201ENST00000345093 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
RNF41-201ENST00000345093 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
RNF41-201ENST00000345093 CARMIL2Q6F5E8 1435 aa13.71□□□□□ -0.21
RNF41-201ENST00000345093 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
RNF41-201ENST00000345093 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
RNF41-201ENST00000345093 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
RNF41-201ENST00000345093 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
RNF41-201ENST00000345093 PPARGC1BQ86YN6 1023 aaKnown RBP13.68□□□□□ -0.22
RNF41-201ENST00000345093 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
RNF41-201ENST00000345093 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
RNF41-201ENST00000345093 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
RNF41-201ENST00000345093 HDGFP51858 240 aaKnown RBP13.64□□□□□ -0.23
RNF41-201ENST00000345093 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
RNF41-201ENST00000345093 CLIP1P30622 1438 aa13.61□□□□□ -0.23
RNF41-201ENST00000345093 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
RNF41-201ENST00000345093 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
RNF41-201ENST00000345093 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
RNF41-201ENST00000345093 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
RNF41-201ENST00000345093 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
RNF41-201ENST00000345093 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
RNF41-201ENST00000345093 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
RNF41-201ENST00000345093 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
RNF41-201ENST00000345093 SOGA1O94964 1423 aa13.53□□□□□ -0.24
RNF41-201ENST00000345093 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.24
RNF41-201ENST00000345093 KANK1Q14678 1352 aa13.52□□□□□ -0.25
RNF41-201ENST00000345093 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
RNF41-201ENST00000345093 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
RNF41-201ENST00000345093 CUX2O14529 1486 aa13.5□□□□□ -0.25
RNF41-201ENST00000345093 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
RNF41-201ENST00000345093 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
RNF41-201ENST00000345093 TNIKQ9UKE5 1360 aa13.49□□□□□ -0.25
RNF41-201ENST00000345093 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
RNF41-201ENST00000345093 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
RNF41-201ENST00000345093 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms