RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
TRIM9-203ENST00000360392 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
TRIM9-203ENST00000360392 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
TRIM9-203ENST00000360392 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
TRIM9-203ENST00000360392 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
TRIM9-203ENST00000360392 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
TRIM9-203ENST00000360392 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
TRIM9-203ENST00000360392 HRCP23327 699 aa16.01■□□□□ 0.15
TRIM9-203ENST00000360392 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
TRIM9-203ENST00000360392 MYT1Q01538 1121 aa15.93■□□□□ 0.14
TRIM9-203ENST00000360392 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
TRIM9-203ENST00000360392 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
TRIM9-203ENST00000360392 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
TRIM9-203ENST00000360392 ABCC9O60706 1549 aa15.64■□□□□ 0.09
TRIM9-203ENST00000360392 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
TRIM9-203ENST00000360392 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
TRIM9-203ENST00000360392 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
TRIM9-203ENST00000360392 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
TRIM9-203ENST00000360392 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
TRIM9-203ENST00000360392 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
TRIM9-203ENST00000360392 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
TRIM9-203ENST00000360392 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
TRIM9-203ENST00000360392 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.03
TRIM9-203ENST00000360392 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
TRIM9-203ENST00000360392 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRIM9-203ENST00000360392 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
TRIM9-203ENST00000360392 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
TRIM9-203ENST00000360392 NACADO15069 1562 aa15.13■□□□□ 0.01
TRIM9-203ENST00000360392 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
TRIM9-203ENST00000360392 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
TRIM9-203ENST00000360392 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
TRIM9-203ENST00000360392 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
TRIM9-203ENST00000360392 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
TRIM9-203ENST00000360392 WIZO95785 1651 aa14.98□□□□□ -0.01
TRIM9-203ENST00000360392 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
TRIM9-203ENST00000360392 YTHDC1Q96MU7 727 aaKnown RBP14.95□□□□□ -0.02
TRIM9-203ENST00000360392 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
TRIM9-203ENST00000360392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
TRIM9-203ENST00000360392 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
TRIM9-203ENST00000360392 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
TRIM9-203ENST00000360392 BCL11AQ9H165 835 aa14.77□□□□□ -0.05
TRIM9-203ENST00000360392 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
TRIM9-203ENST00000360392 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
TRIM9-203ENST00000360392 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
TRIM9-203ENST00000360392 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
TRIM9-203ENST00000360392 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
TRIM9-203ENST00000360392 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
TRIM9-203ENST00000360392 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
TRIM9-203ENST00000360392 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
TRIM9-203ENST00000360392 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
TRIM9-203ENST00000360392 SOGA1O94964 1423 aa14.57□□□□□ -0.08
TRIM9-203ENST00000360392 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
TRIM9-203ENST00000360392 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
TRIM9-203ENST00000360392 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
TRIM9-203ENST00000360392 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
TRIM9-203ENST00000360392 APLP2Q06481 763 aa14.47□□□□□ -0.09
TRIM9-203ENST00000360392 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
TRIM9-203ENST00000360392 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
TRIM9-203ENST00000360392 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
TRIM9-203ENST00000360392 ATAD2BQ9ULI0 1458 aa14.4□□□□□ -0.1
TRIM9-203ENST00000360392 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
TRIM9-203ENST00000360392 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
TRIM9-203ENST00000360392 PRKCSHP14314 528 aaPredicted RBP14.38□□□□□ -0.11
TRIM9-203ENST00000360392 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
TRIM9-203ENST00000360392 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
TRIM9-203ENST00000360392 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
TRIM9-203ENST00000360392 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
TRIM9-203ENST00000360392 BCANQ96GW7 911 aa14.26□□□□□ -0.13
TRIM9-203ENST00000360392 ITGAEP38570 1179 aa14.24□□□□□ -0.13
TRIM9-203ENST00000360392 ATP1B4Q9UN42 357 aaPredicted RBP14.24□□□□□ -0.13
TRIM9-203ENST00000360392 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
TRIM9-203ENST00000360392 MIER1Q8N108 512 aa14.22□□□□□ -0.13
TRIM9-203ENST00000360392 EEA1Q15075 1411 aa14.22□□□□□ -0.13
TRIM9-203ENST00000360392 CLIP1P30622 1438 aa14.17□□□□□ -0.14
TRIM9-203ENST00000360392 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
TRIM9-203ENST00000360392 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
TRIM9-203ENST00000360392 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
TRIM9-203ENST00000360392 NEFLP07196 543 aa14.11□□□□□ -0.15
TRIM9-203ENST00000360392 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
TRIM9-203ENST00000360392 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
TRIM9-203ENST00000360392 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
TRIM9-203ENST00000360392 KANK4Q5T7N3 995 aaPredicted RBP14.04□□□□□ -0.16
TRIM9-203ENST00000360392 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
TRIM9-203ENST00000360392 CUX1P39880 1505 aa14.02□□□□□ -0.17
TRIM9-203ENST00000360392 KIF21BO75037 1637 aa14.01□□□□□ -0.17
TRIM9-203ENST00000360392 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
TRIM9-203ENST00000360392 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
TRIM9-203ENST00000360392 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
TRIM9-203ENST00000360392 CFTRP13569 1480 aa13.95□□□□□ -0.18
TRIM9-203ENST00000360392 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
TRIM9-203ENST00000360392 FKBP8Q14318 412 aa13.93□□□□□ -0.18
TRIM9-203ENST00000360392 FAM50AQ14320 339 aaKnown RBP13.92□□□□□ -0.18
TRIM9-203ENST00000360392 CUX2O14529 1486 aa13.92□□□□□ -0.18
TRIM9-203ENST00000360392 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
TRIM9-203ENST00000360392 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
TRIM9-203ENST00000360392 CLSPNQ9HAW4 1339 aa13.91□□□□□ -0.18
TRIM9-203ENST00000360392 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
TRIM9-203ENST00000360392 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
TRIM9-203ENST00000360392 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
TRIM9-203ENST00000360392 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms