RNA–Protein interactions for RNA: ENST00000240423.8

NCAPH-201, Transcript of non-SMC condensin I complex subunit H, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPH, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPH-201ENST00000240423 NISCHQ9Y2I1 1504 aa17.07■□□□□ 0.32
NCAPH-201ENST00000240423 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
NCAPH-201ENST00000240423 ABCC9O60706 1549 aa15.17■□□□□ 0.02
NCAPH-201ENST00000240423 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.06
NCAPH-201ENST00000240423 NACADO15069 1562 aa14.64□□□□□ -0.07
NCAPH-201ENST00000240423 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
NCAPH-201ENST00000240423 UNC13AQ9UPW8 1703 aa14.33□□□□□ -0.12
NCAPH-201ENST00000240423 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
NCAPH-201ENST00000240423 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
NCAPH-201ENST00000240423 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
NCAPH-201ENST00000240423 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
NCAPH-201ENST00000240423 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
NCAPH-201ENST00000240423 HRCP23327 699 aa14.14□□□□□ -0.15
NCAPH-201ENST00000240423 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
NCAPH-201ENST00000240423 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
NCAPH-201ENST00000240423 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
NCAPH-201ENST00000240423 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
NCAPH-201ENST00000240423 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
NCAPH-201ENST00000240423 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
NCAPH-201ENST00000240423 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
NCAPH-201ENST00000240423 PPARGC1BQ86YN6 1023 aaKnown RBP13.82□□□□□ -0.2
NCAPH-201ENST00000240423 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
NCAPH-201ENST00000240423 CECR2Q9BXF3 1484 aa13.78□□□□□ -0.2
NCAPH-201ENST00000240423 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
NCAPH-201ENST00000240423 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
NCAPH-201ENST00000240423 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
NCAPH-201ENST00000240423 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
NCAPH-201ENST00000240423 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
NCAPH-201ENST00000240423 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
NCAPH-201ENST00000240423 CUX2O14529 1486 aa13.39□□□□□ -0.27
NCAPH-201ENST00000240423 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
NCAPH-201ENST00000240423 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
NCAPH-201ENST00000240423 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
NCAPH-201ENST00000240423 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
NCAPH-201ENST00000240423 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
NCAPH-201ENST00000240423 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
NCAPH-201ENST00000240423 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
NCAPH-201ENST00000240423 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
NCAPH-201ENST00000240423 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
NCAPH-201ENST00000240423 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
NCAPH-201ENST00000240423 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
NCAPH-201ENST00000240423 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
NCAPH-201ENST00000240423 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
NCAPH-201ENST00000240423 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
NCAPH-201ENST00000240423 NESP48681 1621 aa13.01□□□□□ -0.33
NCAPH-201ENST00000240423 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
NCAPH-201ENST00000240423 MYT1Q01538 1121 aa13□□□□□ -0.33
NCAPH-201ENST00000240423 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
NCAPH-201ENST00000240423 WDR62O43379 1518 aa12.97□□□□□ -0.33
NCAPH-201ENST00000240423 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
NCAPH-201ENST00000240423 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
NCAPH-201ENST00000240423 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
NCAPH-201ENST00000240423 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
NCAPH-201ENST00000240423 WIZO95785 1651 aa12.89□□□□□ -0.35
NCAPH-201ENST00000240423 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
NCAPH-201ENST00000240423 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
NCAPH-201ENST00000240423 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
NCAPH-201ENST00000240423 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
NCAPH-201ENST00000240423 CFTRP13569 1480 aa12.85□□□□□ -0.35
NCAPH-201ENST00000240423 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
NCAPH-201ENST00000240423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
NCAPH-201ENST00000240423 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
NCAPH-201ENST00000240423 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
NCAPH-201ENST00000240423 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
NCAPH-201ENST00000240423 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
NCAPH-201ENST00000240423 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
NCAPH-201ENST00000240423 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
NCAPH-201ENST00000240423 URB2Q14146 1524 aaKnown RBP12.68□□□□□ -0.38
NCAPH-201ENST00000240423 IFT140Q96RY7 1462 aa12.64□□□□□ -0.39
NCAPH-201ENST00000240423 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
NCAPH-201ENST00000240423 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
NCAPH-201ENST00000240423 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
NCAPH-201ENST00000240423 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
NCAPH-201ENST00000240423 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
NCAPH-201ENST00000240423 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
NCAPH-201ENST00000240423 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
NCAPH-201ENST00000240423 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
NCAPH-201ENST00000240423 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
NCAPH-201ENST00000240423 EIF4G3O43432 1585 aaKnown RBP12.51□□□□□ -0.41
NCAPH-201ENST00000240423 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NCAPH-201ENST00000240423 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
NCAPH-201ENST00000240423 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
NCAPH-201ENST00000240423 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
NCAPH-201ENST00000240423 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
NCAPH-201ENST00000240423 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
NCAPH-201ENST00000240423 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
NCAPH-201ENST00000240423 CHD1O14646 1710 aa12.42□□□□□ -0.42
NCAPH-201ENST00000240423 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
NCAPH-201ENST00000240423 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
NCAPH-201ENST00000240423 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
NCAPH-201ENST00000240423 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
NCAPH-201ENST00000240423 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
NCAPH-201ENST00000240423 SOGA1O94964 1423 aa12.33□□□□□ -0.44
NCAPH-201ENST00000240423 SYNJ1O43426 1573 aa12.33□□□□□ -0.44
NCAPH-201ENST00000240423 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
NCAPH-201ENST00000240423 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
NCAPH-201ENST00000240423 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
NCAPH-201ENST00000240423 CUX1P39880 1505 aa12.3□□□□□ -0.44
NCAPH-201ENST00000240423 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
NCAPH-201ENST00000240423 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms