RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 MYT1Q01538 1121 aa17.71■□□□□ 0.43
SATB1-204ENST00000417717 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
SATB1-204ENST00000417717 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.39
SATB1-204ENST00000417717 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
SATB1-204ENST00000417717 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
SATB1-204ENST00000417717 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
SATB1-204ENST00000417717 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
SATB1-204ENST00000417717 ZEB1P37275 1124 aaPredicted RBP15.95■□□□□ 0.14
SATB1-204ENST00000417717 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
SATB1-204ENST00000417717 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
SATB1-204ENST00000417717 NEFLP07196 543 aa15.65■□□□□ 0.1
SATB1-204ENST00000417717 HRCP23327 699 aa15.53■□□□□ 0.08
SATB1-204ENST00000417717 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
SATB1-204ENST00000417717 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
SATB1-204ENST00000417717 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
SATB1-204ENST00000417717 GLIPR1L2Q4G1C9 344 aa15.28■□□□□ 0.04
SATB1-204ENST00000417717 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
SATB1-204ENST00000417717 APLP2Q06481 763 aa15.11■□□□□ 0.01
SATB1-204ENST00000417717 MYT1LQ9UL68 1186 aa15.08■□□□□ 0
SATB1-204ENST00000417717 GTF3C3Q9Y5Q9 886 aa15.06■□□□□ 0
SATB1-204ENST00000417717 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
SATB1-204ENST00000417717 CCDC180Q9P1Z9 1646 aa15.01□□□□□ -0.01
SATB1-204ENST00000417717 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
SATB1-204ENST00000417717 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
SATB1-204ENST00000417717 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
SATB1-204ENST00000417717 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
SATB1-204ENST00000417717 PPARGC1BQ86YN6 1023 aaKnown RBP14.87□□□□□ -0.03
SATB1-204ENST00000417717 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
SATB1-204ENST00000417717 DIEXFQ68CQ4 756 aaKnown RBP14.82□□□□□ -0.04
SATB1-204ENST00000417717 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
SATB1-204ENST00000417717 CDK11AQ9UQ88 783 aaPredicted RBP14.75□□□□□ -0.05
SATB1-204ENST00000417717 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
SATB1-204ENST00000417717 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
SATB1-204ENST00000417717 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
SATB1-204ENST00000417717 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
SATB1-204ENST00000417717 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
SATB1-204ENST00000417717 ANP32AP39687 249 aaKnown RBP14.57□□□□□ -0.08
SATB1-204ENST00000417717 BCANQ96GW7 911 aa14.54□□□□□ -0.08
SATB1-204ENST00000417717 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
SATB1-204ENST00000417717 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
SATB1-204ENST00000417717 TNNT2P45379 298 aaPredicted RBP14.44□□□□□ -0.1
SATB1-204ENST00000417717 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
SATB1-204ENST00000417717 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
SATB1-204ENST00000417717 ABCC9O60706 1549 aa14.35□□□□□ -0.11
SATB1-204ENST00000417717 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
SATB1-204ENST00000417717 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
SATB1-204ENST00000417717 NCLP19338 710 aaKnown RBP14.3□□□□□ -0.12
SATB1-204ENST00000417717 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
SATB1-204ENST00000417717 NBR1Q14596 966 aa14.28□□□□□ -0.12
SATB1-204ENST00000417717 CDK11BP21127 795 aaKnown RBP14.26□□□□□ -0.13
SATB1-204ENST00000417717 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
SATB1-204ENST00000417717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
SATB1-204ENST00000417717 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
SATB1-204ENST00000417717 NACADO15069 1562 aa14.2□□□□□ -0.14
SATB1-204ENST00000417717 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
SATB1-204ENST00000417717 FKBP8Q14318 412 aa14.17□□□□□ -0.14
SATB1-204ENST00000417717 UBTFP17480 764 aaKnown RBP14.14□□□□□ -0.15
SATB1-204ENST00000417717 NPM2Q86SE8 214 aaKnown RBP14.14□□□□□ -0.15
SATB1-204ENST00000417717 ANP32CO43423 234 aa14.13□□□□□ -0.15
SATB1-204ENST00000417717 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
SATB1-204ENST00000417717 NEFMP07197 916 aa14.1□□□□□ -0.15
SATB1-204ENST00000417717 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
SATB1-204ENST00000417717 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
SATB1-204ENST00000417717 NAP1L5Q96NT1 182 aaPredicted RBP14.06□□□□□ -0.16
SATB1-204ENST00000417717 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.16
SATB1-204ENST00000417717 DEKP35659 375 aaKnown RBP14.02□□□□□ -0.16
SATB1-204ENST00000417717 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
SATB1-204ENST00000417717 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
SATB1-204ENST00000417717 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
SATB1-204ENST00000417717 LOC105371045A0A1W2PR82 267 aa13.98□□□□□ -0.17
SATB1-204ENST00000417717 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
SATB1-204ENST00000417717 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.18
SATB1-204ENST00000417717 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
SATB1-204ENST00000417717 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
SATB1-204ENST00000417717 PODXL2Q9NZ53 605 aa13.92□□□□□ -0.18
SATB1-204ENST00000417717 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
SATB1-204ENST00000417717 ZNF326Q5BKZ1 582 aaKnown RBP13.89□□□□□ -0.19
SATB1-204ENST00000417717 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
SATB1-204ENST00000417717 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
SATB1-204ENST00000417717 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
SATB1-204ENST00000417717 ARXQ96QS3 562 aa13.87□□□□□ -0.19
SATB1-204ENST00000417717 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
SATB1-204ENST00000417717 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
SATB1-204ENST00000417717 CCDC136Q96JN2 1154 aa13.85□□□□□ -0.19
SATB1-204ENST00000417717 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
SATB1-204ENST00000417717 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
SATB1-204ENST00000417717 ITGAEP38570 1179 aa13.8□□□□□ -0.2
SATB1-204ENST00000417717 PTMSP20962 102 aa13.79□□□□□ -0.2
SATB1-204ENST00000417717 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
SATB1-204ENST00000417717 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
SATB1-204ENST00000417717 PNNQ9H307 717 aaKnown RBP13.76□□□□□ -0.21
SATB1-204ENST00000417717 BECN1Q14457 450 aa13.75□□□□□ -0.21
SATB1-204ENST00000417717 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
SATB1-204ENST00000417717 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
SATB1-204ENST00000417717 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
SATB1-204ENST00000417717 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
SATB1-204ENST00000417717 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
SATB1-204ENST00000417717 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
SATB1-204ENST00000417717 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
SATB1-204ENST00000417717 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms