RNA–Protein interactions for RNA: ENST00000381322.5

CLOCK-202, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-202ENST00000381322 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CLOCK-202ENST00000381322 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
CLOCK-202ENST00000381322 ABCC9O60706 1549 aa15.8■□□□□ 0.12
CLOCK-202ENST00000381322 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
CLOCK-202ENST00000381322 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLOCK-202ENST00000381322 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
CLOCK-202ENST00000381322 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
CLOCK-202ENST00000381322 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
CLOCK-202ENST00000381322 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
CLOCK-202ENST00000381322 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
CLOCK-202ENST00000381322 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
CLOCK-202ENST00000381322 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
CLOCK-202ENST00000381322 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
CLOCK-202ENST00000381322 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
CLOCK-202ENST00000381322 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
CLOCK-202ENST00000381322 NACADO15069 1562 aa14.21□□□□□ -0.13
CLOCK-202ENST00000381322 FBLN2P98095 1184 aa14.16□□□□□ -0.14
CLOCK-202ENST00000381322 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
CLOCK-202ENST00000381322 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
CLOCK-202ENST00000381322 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
CLOCK-202ENST00000381322 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
CLOCK-202ENST00000381322 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
CLOCK-202ENST00000381322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
CLOCK-202ENST00000381322 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
CLOCK-202ENST00000381322 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
CLOCK-202ENST00000381322 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
CLOCK-202ENST00000381322 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
CLOCK-202ENST00000381322 RSF1Q96T23 1441 aaPredicted RBP13.61□□□□□ -0.23
CLOCK-202ENST00000381322 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
CLOCK-202ENST00000381322 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
CLOCK-202ENST00000381322 APLP2Q06481 763 aa13.59□□□□□ -0.23
CLOCK-202ENST00000381322 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
CLOCK-202ENST00000381322 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
CLOCK-202ENST00000381322 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
CLOCK-202ENST00000381322 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
CLOCK-202ENST00000381322 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
CLOCK-202ENST00000381322 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
CLOCK-202ENST00000381322 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
CLOCK-202ENST00000381322 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
CLOCK-202ENST00000381322 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
CLOCK-202ENST00000381322 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
CLOCK-202ENST00000381322 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
CLOCK-202ENST00000381322 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
CLOCK-202ENST00000381322 LOC105371045A0A1W2PR82 267 aa13.42□□□□□ -0.26
CLOCK-202ENST00000381322 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
CLOCK-202ENST00000381322 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLOCK-202ENST00000381322 NESP48681 1621 aa13.4□□□□□ -0.26
CLOCK-202ENST00000381322 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
CLOCK-202ENST00000381322 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
CLOCK-202ENST00000381322 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
CLOCK-202ENST00000381322 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
CLOCK-202ENST00000381322 WIZO95785 1651 aa13.3□□□□□ -0.28
CLOCK-202ENST00000381322 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
CLOCK-202ENST00000381322 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
CLOCK-202ENST00000381322 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
CLOCK-202ENST00000381322 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
CLOCK-202ENST00000381322 ITGAEP38570 1179 aa13.26□□□□□ -0.29
CLOCK-202ENST00000381322 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
CLOCK-202ENST00000381322 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
CLOCK-202ENST00000381322 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.29
CLOCK-202ENST00000381322 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
CLOCK-202ENST00000381322 SOGA1O94964 1423 aa13.18□□□□□ -0.3
CLOCK-202ENST00000381322 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
CLOCK-202ENST00000381322 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
CLOCK-202ENST00000381322 ZNF777Q9ULD5 760 aaPredicted RBP13.15□□□□□ -0.3
CLOCK-202ENST00000381322 CUX2O14529 1486 aa13.09□□□□□ -0.31
CLOCK-202ENST00000381322 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLOCK-202ENST00000381322 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
CLOCK-202ENST00000381322 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
CLOCK-202ENST00000381322 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
CLOCK-202ENST00000381322 JPH4Q96JJ6 628 aa13□□□□□ -0.33
CLOCK-202ENST00000381322 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
CLOCK-202ENST00000381322 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
CLOCK-202ENST00000381322 ARID4BQ4LE39 1312 aaPredicted RBP12.98□□□□□ -0.33
CLOCK-202ENST00000381322 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
CLOCK-202ENST00000381322 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
CLOCK-202ENST00000381322 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
CLOCK-202ENST00000381322 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
CLOCK-202ENST00000381322 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
CLOCK-202ENST00000381322 CFTRP13569 1480 aa12.91□□□□□ -0.34
CLOCK-202ENST00000381322 MLECQ14165 292 aa12.91□□□□□ -0.34
CLOCK-202ENST00000381322 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
CLOCK-202ENST00000381322 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
CLOCK-202ENST00000381322 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
CLOCK-202ENST00000381322 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
CLOCK-202ENST00000381322 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
CLOCK-202ENST00000381322 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
CLOCK-202ENST00000381322 BCANQ96GW7 911 aa12.84□□□□□ -0.35
CLOCK-202ENST00000381322 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
CLOCK-202ENST00000381322 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
CLOCK-202ENST00000381322 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
CLOCK-202ENST00000381322 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
CLOCK-202ENST00000381322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■□□□ 12.2
CLOCK-202ENST00000381322 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
CLOCK-202ENST00000381322 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
CLOCK-202ENST00000381322 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
CLOCK-202ENST00000381322 POLA1P09884 1462 aaPredicted RBP12.75□□□□□ -0.37
CLOCK-202ENST00000381322 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CLOCK-202ENST00000381322 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
CLOCK-202ENST00000381322 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms