Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 TATDN2P3-201ENST00000452855 3665 ntBASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 AL606537.1-201ENST00000607258 2011 ntBASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 EIF3EP2-201ENST00000423042 1814 ntBASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 AC138915.4-201ENST00000565549 4147 ntBASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 DDX6P1-205ENST00000441966 1436 ntBASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
KRTAP4-3Q9BYR4 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 AC009948.3-201ENST00000603415 1798 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 OGFOD1P1-201ENST00000447552 1592 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 AC139769.1-204ENST00000472297 1931 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 METTL21EP-201ENST00000298105 713 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU5F-6P-201ENST00000362979 116 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNA5SP114-201ENST00000363780 113 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-270P-201ENST00000364131 105 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.252-201ENST00000364556 101 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.380-201ENST00000365663 111 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-306P-201ENST00000384617 107 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-606P-201ENST00000384721 111 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 Y_RNA.568-201ENST00000384742 113 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 SNORA7A-201ENST00000384765 139 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 MIR99A-201ENST00000384906 81 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-823P-201ENST00000391042 103 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 RNU6-131P-201ENST00000391144 107 ntBASIC2.41□□□□□ -2.02
KRTAP4-3Q9BYR4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms