RNA–Protein interactions for RNA: ENST00000635258.1

LINC01427-202, Transcript of long intergenic non-protein coding RNA 1427, humanhuman

TSL 5 BASIC

Gene LINC01427, Length 4,566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01427-202ENST00000635258 NISCHQ9Y2I1 1504 aa16.9■□□□□ 0.3
LINC01427-202ENST00000635258 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LINC01427-202ENST00000635258 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.04
LINC01427-202ENST00000635258 ABCC9O60706 1549 aa14.21□□□□□ -0.14
LINC01427-202ENST00000635258 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
LINC01427-202ENST00000635258 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.17
LINC01427-202ENST00000635258 NACADO15069 1562 aa14.01□□□□□ -0.17
LINC01427-202ENST00000635258 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
LINC01427-202ENST00000635258 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
LINC01427-202ENST00000635258 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
LINC01427-202ENST00000635258 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.22
LINC01427-202ENST00000635258 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
LINC01427-202ENST00000635258 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC01427-202ENST00000635258 BAZ1AQ9NRL2 1556 aaPredicted RBP13.26□□□□□ -0.29
LINC01427-202ENST00000635258 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
LINC01427-202ENST00000635258 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
LINC01427-202ENST00000635258 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
LINC01427-202ENST00000635258 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
LINC01427-202ENST00000635258 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
LINC01427-202ENST00000635258 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
LINC01427-202ENST00000635258 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
LINC01427-202ENST00000635258 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
LINC01427-202ENST00000635258 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
LINC01427-202ENST00000635258 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
LINC01427-202ENST00000635258 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
LINC01427-202ENST00000635258 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
LINC01427-202ENST00000635258 NCAPD3P42695 1498 aa12.84□□□□□ -0.35
LINC01427-202ENST00000635258 APLP2Q06481 763 aa12.79□□□□□ -0.36
LINC01427-202ENST00000635258 UNC13AQ9UPW8 1703 aa12.78□□□□□ -0.36
LINC01427-202ENST00000635258 HMGXB3Q12766 1538 aa12.77□□□□□ -0.36
LINC01427-202ENST00000635258 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
LINC01427-202ENST00000635258 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
LINC01427-202ENST00000635258 WIZO95785 1651 aa12.69□□□□□ -0.38
LINC01427-202ENST00000635258 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
LINC01427-202ENST00000635258 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
LINC01427-202ENST00000635258 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
LINC01427-202ENST00000635258 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
LINC01427-202ENST00000635258 EEA1Q15075 1411 aa12.67□□□□□ -0.38
LINC01427-202ENST00000635258 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
LINC01427-202ENST00000635258 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
LINC01427-202ENST00000635258 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
LINC01427-202ENST00000635258 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
LINC01427-202ENST00000635258 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
LINC01427-202ENST00000635258 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
LINC01427-202ENST00000635258 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
LINC01427-202ENST00000635258 CFTRP13569 1480 aa12.47□□□□□ -0.41
LINC01427-202ENST00000635258 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.41
LINC01427-202ENST00000635258 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
LINC01427-202ENST00000635258 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
LINC01427-202ENST00000635258 SOGA1O94964 1423 aa12.35□□□□□ -0.43
LINC01427-202ENST00000635258 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
LINC01427-202ENST00000635258 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
LINC01427-202ENST00000635258 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.43
LINC01427-202ENST00000635258 FBLN2P98095 1184 aa12.33□□□□□ -0.44
LINC01427-202ENST00000635258 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
LINC01427-202ENST00000635258 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
LINC01427-202ENST00000635258 CUX2O14529 1486 aa12.3□□□□□ -0.44
LINC01427-202ENST00000635258 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.44
LINC01427-202ENST00000635258 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
LINC01427-202ENST00000635258 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
LINC01427-202ENST00000635258 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
LINC01427-202ENST00000635258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
LINC01427-202ENST00000635258 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
LINC01427-202ENST00000635258 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
LINC01427-202ENST00000635258 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
LINC01427-202ENST00000635258 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
LINC01427-202ENST00000635258 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
LINC01427-202ENST00000635258 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
LINC01427-202ENST00000635258 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01427-202ENST00000635258 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
LINC01427-202ENST00000635258 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
LINC01427-202ENST00000635258 NESP48681 1621 aa12.15□□□□□ -0.46
LINC01427-202ENST00000635258 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
LINC01427-202ENST00000635258 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
LINC01427-202ENST00000635258 CLIP1P30622 1438 aa12.13□□□□□ -0.47
LINC01427-202ENST00000635258 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
LINC01427-202ENST00000635258 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
LINC01427-202ENST00000635258 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
LINC01427-202ENST00000635258 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
LINC01427-202ENST00000635258 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
LINC01427-202ENST00000635258 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
LINC01427-202ENST00000635258 CUX1P39880 1505 aa12.09□□□□□ -0.47
LINC01427-202ENST00000635258 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
LINC01427-202ENST00000635258 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
LINC01427-202ENST00000635258 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
LINC01427-202ENST00000635258 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
LINC01427-202ENST00000635258 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
LINC01427-202ENST00000635258 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
LINC01427-202ENST00000635258 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
LINC01427-202ENST00000635258 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
LINC01427-202ENST00000635258 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
LINC01427-202ENST00000635258 IGF1RP08069 1367 aa12.02□□□□□ -0.48
LINC01427-202ENST00000635258 FMN1Q68DA7 1419 aa12.02□□□□□ -0.49
LINC01427-202ENST00000635258 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
LINC01427-202ENST00000635258 KIF21BO75037 1637 aa12□□□□□ -0.49
LINC01427-202ENST00000635258 CUL7Q14999 1698 aa12□□□□□ -0.49
LINC01427-202ENST00000635258 MAGI1Q96QZ7 1491 aaPredicted RBP12□□□□□ -0.49
LINC01427-202ENST00000635258 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
LINC01427-202ENST00000635258 WDR62O43379 1518 aa11.99□□□□□ -0.49
LINC01427-202ENST00000635258 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms