RNA–Protein interactions for RNA: ENST00000488120.2

DCX-205, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene DCX, Length 2,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-205ENST00000488120 NISCHQ9Y2I1 1504 aa16.2■□□□□ 0.18
DCX-205ENST00000488120 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
DCX-205ENST00000488120 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.22
DCX-205ENST00000488120 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
DCX-205ENST00000488120 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
DCX-205ENST00000488120 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
DCX-205ENST00000488120 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
DCX-205ENST00000488120 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.32
DCX-205ENST00000488120 NACADO15069 1562 aa12.96□□□□□ -0.34
DCX-205ENST00000488120 ABCC9O60706 1549 aa12.91□□□□□ -0.34
DCX-205ENST00000488120 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
DCX-205ENST00000488120 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
DCX-205ENST00000488120 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
DCX-205ENST00000488120 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
DCX-205ENST00000488120 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
DCX-205ENST00000488120 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
DCX-205ENST00000488120 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
DCX-205ENST00000488120 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
DCX-205ENST00000488120 WIZO95785 1651 aa12.4□□□□□ -0.42
DCX-205ENST00000488120 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
DCX-205ENST00000488120 TOP2AP11388 1531 aaKnown RBP12.36□□□□□ -0.43
DCX-205ENST00000488120 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
DCX-205ENST00000488120 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
DCX-205ENST00000488120 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.45
DCX-205ENST00000488120 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
DCX-205ENST00000488120 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
DCX-205ENST00000488120 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
DCX-205ENST00000488120 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
DCX-205ENST00000488120 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
DCX-205ENST00000488120 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
DCX-205ENST00000488120 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
DCX-205ENST00000488120 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
DCX-205ENST00000488120 EEA1Q15075 1411 aa12.05□□□□□ -0.48
DCX-205ENST00000488120 HRCP23327 699 aa12.04□□□□□ -0.48
DCX-205ENST00000488120 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
DCX-205ENST00000488120 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
DCX-205ENST00000488120 ABCC8Q09428 1581 aa12.02□□□□□ -0.48
DCX-205ENST00000488120 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
DCX-205ENST00000488120 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
DCX-205ENST00000488120 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
DCX-205ENST00000488120 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
DCX-205ENST00000488120 SOGA1O94964 1423 aa11.87□□□□□ -0.51
DCX-205ENST00000488120 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
DCX-205ENST00000488120 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
DCX-205ENST00000488120 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
DCX-205ENST00000488120 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
DCX-205ENST00000488120 KIF21BO75037 1637 aa11.83□□□□□ -0.52
DCX-205ENST00000488120 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
DCX-205ENST00000488120 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
DCX-205ENST00000488120 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
DCX-205ENST00000488120 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
DCX-205ENST00000488120 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
DCX-205ENST00000488120 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
DCX-205ENST00000488120 CFTRP13569 1480 aa11.76□□□□□ -0.53
DCX-205ENST00000488120 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
DCX-205ENST00000488120 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
DCX-205ENST00000488120 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
DCX-205ENST00000488120 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
DCX-205ENST00000488120 CUX1P39880 1505 aa11.67□□□□□ -0.54
DCX-205ENST00000488120 CLIP1P30622 1438 aa11.66□□□□□ -0.54
DCX-205ENST00000488120 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
DCX-205ENST00000488120 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
DCX-205ENST00000488120 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.55
DCX-205ENST00000488120 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
DCX-205ENST00000488120 RAPGEF2Q9Y4G8 1499 aa11.64□□□□□ -0.55
DCX-205ENST00000488120 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
DCX-205ENST00000488120 PPARGC1BQ86YN6 1023 aaKnown RBP11.61□□□□□ -0.55
DCX-205ENST00000488120 APLP2Q06481 763 aa11.54□□□□□ -0.56
DCX-205ENST00000488120 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.57
DCX-205ENST00000488120 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
DCX-205ENST00000488120 CUX2O14529 1486 aa11.51□□□□□ -0.57
DCX-205ENST00000488120 DNMBPQ6XZF7 1577 aa11.51□□□□□ -0.57
DCX-205ENST00000488120 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
DCX-205ENST00000488120 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
DCX-205ENST00000488120 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
DCX-205ENST00000488120 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
DCX-205ENST00000488120 IGF1RP08069 1367 aa11.45□□□□□ -0.58
DCX-205ENST00000488120 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
DCX-205ENST00000488120 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
DCX-205ENST00000488120 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
DCX-205ENST00000488120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
DCX-205ENST00000488120 CARMIL1Q5VZK9 1371 aa11.42□□□□□ -0.58
DCX-205ENST00000488120 ARHGAP35Q9NRY4 1499 aa11.41□□□□□ -0.58
DCX-205ENST00000488120 CUL7Q14999 1698 aa11.41□□□□□ -0.58
DCX-205ENST00000488120 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
DCX-205ENST00000488120 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
DCX-205ENST00000488120 MAP3K1Q13233 1512 aa11.38□□□□□ -0.59
DCX-205ENST00000488120 RANGAP1P46060 587 aaPredicted RBP11.37□□□□□ -0.59
DCX-205ENST00000488120 NESP48681 1621 aa11.36□□□□□ -0.59
DCX-205ENST00000488120 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
DCX-205ENST00000488120 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
DCX-205ENST00000488120 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
DCX-205ENST00000488120 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
DCX-205ENST00000488120 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
DCX-205ENST00000488120 RAD54L2Q9Y4B4 1467 aa11.33□□□□□ -0.6
DCX-205ENST00000488120 TIAM1Q13009 1591 aa11.31□□□□□ -0.6
DCX-205ENST00000488120 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
DCX-205ENST00000488120 CTTNBP2Q8WZ74 1663 aa11.29□□□□□ -0.6
DCX-205ENST00000488120 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
DCX-205ENST00000488120 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms