RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF17-202ENST00000396495 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
TNFRSF17-202ENST00000396495 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF17-202ENST00000396495 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF17-202ENST00000396495 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
TNFRSF17-202ENST00000396495 FOXD1Q16676 465 aa13.41□□□□□ -0.26
TNFRSF17-202ENST00000396495 MSH5O43196 834 aa12.96□□□□□ -0.33
TNFRSF17-202ENST00000396495 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF17-202ENST00000396495 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
TNFRSF17-202ENST00000396495 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
TNFRSF17-202ENST00000396495 ADRA2BP18089 450 aa11.94□□□□□ -0.5
TNFRSF17-202ENST00000396495 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF17-202ENST00000396495 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
TNFRSF17-202ENST00000396495 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
TNFRSF17-202ENST00000396495 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF17-202ENST00000396495 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
TNFRSF17-202ENST00000396495 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
TNFRSF17-202ENST00000396495 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
TNFRSF17-202ENST00000396495 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF17-202ENST00000396495 POTEHQ6S545 545 aa10.59□□□□□ -0.71
TNFRSF17-202ENST00000396495 DNAJC5BQ9UF47 199 aa10.45□□□□□ -0.74
TNFRSF17-202ENST00000396495 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF17-202ENST00000396495 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
TNFRSF17-202ENST00000396495 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
TNFRSF17-202ENST00000396495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
TNFRSF17-202ENST00000396495 DSG3P32926 999 aa9.98□□□□□ -0.81
TNFRSF17-202ENST00000396495 CAPN15O75808 1086 aa9.97□□□□□ -0.81
TNFRSF17-202ENST00000396495 NCBP3Q53F19 620 aaKnown RBP9.88□□□□□ -0.83
TNFRSF17-202ENST00000396495 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF17-202ENST00000396495 U3KPZ7 1027 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF17-202ENST00000396495 APLP2Q06481 763 aa9.72□□□□□ -0.85
TNFRSF17-202ENST00000396495 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
TNFRSF17-202ENST00000396495 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF17-202ENST00000396495 CHRDL2Q6WN34 429 aa9.64□□□□□ -0.87
TNFRSF17-202ENST00000396495 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF17-202ENST00000396495 SP7Q8TDD2 431 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF17-202ENST00000396495 ABCB7O75027 752 aa9.61□□□□□ -0.87
TNFRSF17-202ENST00000396495 NPM3O75607 178 aaKnown RBP9.57□□□□□ -0.88
TNFRSF17-202ENST00000396495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF17-202ENST00000396495 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
TNFRSF17-202ENST00000396495 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF17-202ENST00000396495 HAX1O00165 279 aa9.31□□□□□ -0.92
TNFRSF17-202ENST00000396495 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
TNFRSF17-202ENST00000396495 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
TNFRSF17-202ENST00000396495 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
TNFRSF17-202ENST00000396495 POLA2Q14181 598 aa9.2□□□□□ -0.94
TNFRSF17-202ENST00000396495 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF17-202ENST00000396495 ZBTB12Q9Y330 459 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF17-202ENST00000396495 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
TNFRSF17-202ENST00000396495 LHX8Q68G74 356 aa9.04□□□□□ -0.96
TNFRSF17-202ENST00000396495 PLSCR2Q9NRY7 297 aa9.04□□□□□ -0.96
TNFRSF17-202ENST00000396495 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
TNFRSF17-202ENST00000396495 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF17-202ENST00000396495 EVX2Q03828 476 aa8.96□□□□□ -0.98
TNFRSF17-202ENST00000396495 OSCARQ8IYS5 282 aa8.91□□□□□ -0.98
TNFRSF17-202ENST00000396495 GABBR2O75899 941 aa8.84□□□□□ -0.99
TNFRSF17-202ENST00000396495 PRKAR2AP13861 404 aaKnown RBP8.82□□□□□ -1
TNFRSF17-202ENST00000396495 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
TNFRSF17-202ENST00000396495 KCNA4P22459 653 aa8.78□□□□□ -1
TNFRSF17-202ENST00000396495 MYT1Q01538 1121 aa8.74□□□□□ -1.01
TNFRSF17-202ENST00000396495 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
TNFRSF17-202ENST00000396495 SPDYE1Q8NFV5 336 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF17-202ENST00000396495 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
TNFRSF17-202ENST00000396495 SPDYE2BA6NHP3 402 aa8.69□□□□□ -1.02
TNFRSF17-202ENST00000396495 SPDYE6P0CI01 402 aa8.69□□□□□ -1.02
TNFRSF17-202ENST00000396495 SPDYE2Q495Y8 402 aa8.69□□□□□ -1.02
TNFRSF17-202ENST00000396495 TTBK1Q5TCY1 1321 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF17-202ENST00000396495 CLCN6P51797 869 aa8.65□□□□□ -1.02
TNFRSF17-202ENST00000396495 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.02
TNFRSF17-202ENST00000396495 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF17-202ENST00000396495 FBLN2P98095 1184 aa8.58□□□□□ -1.04
TNFRSF17-202ENST00000396495 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
TNFRSF17-202ENST00000396495 POTEIP0CG38 1075 aa8.55□□□□□ -1.04
TNFRSF17-202ENST00000396495 POTEMA6NI47 508 aa8.54□□□□□ -1.04
TNFRSF17-202ENST00000396495 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
TNFRSF17-202ENST00000396495 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
TNFRSF17-202ENST00000396495 CD44P16070 742 aaKnown RBP8.52□□□□□ -1.05
TNFRSF17-202ENST00000396495 FOXD4L1Q9NU39 408 aa8.51□□□□□ -1.05
TNFRSF17-202ENST00000396495 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
TNFRSF17-202ENST00000396495 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
TNFRSF17-202ENST00000396495 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF17-202ENST00000396495 SSUH2Q9Y2M2 353 aa8.42□□□□□ -1.06
TNFRSF17-202ENST00000396495 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
TNFRSF17-202ENST00000396495 FARP1Q9Y4F1 1045 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF17-202ENST00000396495 ATXN8OSP0DMR3 200 aa8.34□□□□□ -1.07
TNFRSF17-202ENST00000396495 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
TNFRSF17-202ENST00000396495 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
TNFRSF17-202ENST00000396495 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
TNFRSF17-202ENST00000396495 MAMSTRQ6ZN01 415 aa8.26□□□□□ -1.09
TNFRSF17-202ENST00000396495 SLC4A1APQ9BWU0 796 aaKnown RBP8.26□□□□□ -1.09
TNFRSF17-202ENST00000396495 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
TNFRSF17-202ENST00000396495 DAXXQ9UER7 740 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF17-202ENST00000396495 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
TNFRSF17-202ENST00000396495 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
TNFRSF17-202ENST00000396495 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.1
TNFRSF17-202ENST00000396495 FAM163AQ96GL9 167 aaPredicted RBP8.18□□□□□ -1.1
TNFRSF17-202ENST00000396495 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
TNFRSF17-202ENST00000396495 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
TNFRSF17-202ENST00000396495 SLC39A7Q92504 469 aa8.14□□□□□ -1.11
TNFRSF17-202ENST00000396495 METRNQ9UJH8 293 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms