RNA–Protein interactions for RNA: ENST00000505283.1

PDE8B-208, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-208ENST00000505283 NISCHQ9Y2I1 1504 aa15.4■□□□□ 0.06
PDE8B-208ENST00000505283 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
PDE8B-208ENST00000505283 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
PDE8B-208ENST00000505283 ABCC9O60706 1549 aa13.41□□□□□ -0.26
PDE8B-208ENST00000505283 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.28
PDE8B-208ENST00000505283 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
PDE8B-208ENST00000505283 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
PDE8B-208ENST00000505283 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
PDE8B-208ENST00000505283 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDE8B-208ENST00000505283 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
PDE8B-208ENST00000505283 NACADO15069 1562 aa12.62□□□□□ -0.39
PDE8B-208ENST00000505283 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
PDE8B-208ENST00000505283 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
PDE8B-208ENST00000505283 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
PDE8B-208ENST00000505283 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
PDE8B-208ENST00000505283 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
PDE8B-208ENST00000505283 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
PDE8B-208ENST00000505283 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
PDE8B-208ENST00000505283 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
PDE8B-208ENST00000505283 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
PDE8B-208ENST00000505283 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
PDE8B-208ENST00000505283 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
PDE8B-208ENST00000505283 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
PDE8B-208ENST00000505283 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
PDE8B-208ENST00000505283 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
PDE8B-208ENST00000505283 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
PDE8B-208ENST00000505283 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
PDE8B-208ENST00000505283 WIZO95785 1651 aa11.8□□□□□ -0.52
PDE8B-208ENST00000505283 SMARCA2P51531 1590 aa11.77□□□□□ -0.53
PDE8B-208ENST00000505283 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
PDE8B-208ENST00000505283 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
PDE8B-208ENST00000505283 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
PDE8B-208ENST00000505283 PHF23Q9BUL5 403 aaPredicted RBP11.62□□□□□ -0.55
PDE8B-208ENST00000505283 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
PDE8B-208ENST00000505283 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
PDE8B-208ENST00000505283 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
PDE8B-208ENST00000505283 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
PDE8B-208ENST00000505283 NESP48681 1621 aa11.58□□□□□ -0.56
PDE8B-208ENST00000505283 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
PDE8B-208ENST00000505283 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
PDE8B-208ENST00000505283 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
PDE8B-208ENST00000505283 PEG3Q9GZU2 1588 aa11.52□□□□□ -0.57
PDE8B-208ENST00000505283 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
PDE8B-208ENST00000505283 FANCD2Q9BXW9 1451 aa11.43□□□□□ -0.58
PDE8B-208ENST00000505283 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
PDE8B-208ENST00000505283 FBLN2P98095 1184 aa11.41□□□□□ -0.58
PDE8B-208ENST00000505283 CFTRP13569 1480 aa11.4□□□□□ -0.58
PDE8B-208ENST00000505283 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
PDE8B-208ENST00000505283 WRNQ14191 1432 aaPredicted RBP eCLIP11.36□□□□□ -0.59
PDE8B-208ENST00000505283 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
PDE8B-208ENST00000505283 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
PDE8B-208ENST00000505283 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
PDE8B-208ENST00000505283 UBTFP17480 764 aaKnown RBP11.28□□□□□ -0.6
PDE8B-208ENST00000505283 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
PDE8B-208ENST00000505283 SOGA1O94964 1423 aa11.25□□□□□ -0.61
PDE8B-208ENST00000505283 MRC2Q9UBG0 1479 aa11.24□□□□□ -0.61
PDE8B-208ENST00000505283 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
PDE8B-208ENST00000505283 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.61
PDE8B-208ENST00000505283 CHMP7Q8WUX9 453 aaPredicted RBP11.21□□□□□ -0.62
PDE8B-208ENST00000505283 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
PDE8B-208ENST00000505283 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
PDE8B-208ENST00000505283 CUX2O14529 1486 aa11.19□□□□□ -0.62
PDE8B-208ENST00000505283 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
PDE8B-208ENST00000505283 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
PDE8B-208ENST00000505283 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
PDE8B-208ENST00000505283 CUX1P39880 1505 aa11.17□□□□□ -0.62
PDE8B-208ENST00000505283 AQRO60306 1485 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDE8B-208ENST00000505283 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
PDE8B-208ENST00000505283 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
PDE8B-208ENST00000505283 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
PDE8B-208ENST00000505283 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
PDE8B-208ENST00000505283 DNMBPQ6XZF7 1577 aa11.1□□□□□ -0.63
PDE8B-208ENST00000505283 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
PDE8B-208ENST00000505283 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
PDE8B-208ENST00000505283 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
PDE8B-208ENST00000505283 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
PDE8B-208ENST00000505283 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
PDE8B-208ENST00000505283 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
PDE8B-208ENST00000505283 TOP2BQ02880 1626 aa11.03□□□□□ -0.64
PDE8B-208ENST00000505283 WDR62O43379 1518 aa11.03□□□□□ -0.64
PDE8B-208ENST00000505283 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
PDE8B-208ENST00000505283 THOC2Q8NI27 1593 aaKnown RBP11□□□□□ -0.65
PDE8B-208ENST00000505283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11□□□□□ -0.65
PDE8B-208ENST00000505283 HNRNPUL2Q1KMD3 747 aaKnown RBP11□□□□□ -0.65
PDE8B-208ENST00000505283 OSCARQ8IYS5 282 aa11□□□□□ -0.65
PDE8B-208ENST00000505283 IGF1RP08069 1367 aa11□□□□□ -0.65
PDE8B-208ENST00000505283 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
PDE8B-208ENST00000505283 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
PDE8B-208ENST00000505283 ABCA10Q8WWZ4 1543 aa10.96□□□□□ -0.66
PDE8B-208ENST00000505283 PRDM2Q13029 1718 aa10.96□□□□□ -0.66
PDE8B-208ENST00000505283 PPARGC1BQ86YN6 1023 aaKnown RBP10.94□□□□□ -0.66
PDE8B-208ENST00000505283 EEA1Q15075 1411 aa10.94□□□□□ -0.66
PDE8B-208ENST00000505283 APLP2Q06481 763 aa10.93□□□□□ -0.66
PDE8B-208ENST00000505283 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
PDE8B-208ENST00000505283 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
PDE8B-208ENST00000505283 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.66
PDE8B-208ENST00000505283 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
PDE8B-208ENST00000505283 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
PDE8B-208ENST00000505283 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
PDE8B-208ENST00000505283 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms