RNA–Protein interactions for RNA: ENST00000590740.2

AC060780.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC060780.1, Length 5,084 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC060780.1-202ENST00000590740 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
AC060780.1-202ENST00000590740 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
AC060780.1-202ENST00000590740 SUPT5HO00267 1087 aaKnown RBP13.23□□□□□ -0.29
AC060780.1-202ENST00000590740 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
AC060780.1-202ENST00000590740 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
AC060780.1-202ENST00000590740 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
AC060780.1-202ENST00000590740 APLP2Q06481 763 aa12.74□□□□□ -0.37
AC060780.1-202ENST00000590740 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
AC060780.1-202ENST00000590740 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
AC060780.1-202ENST00000590740 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
AC060780.1-202ENST00000590740 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
AC060780.1-202ENST00000590740 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
AC060780.1-202ENST00000590740 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
AC060780.1-202ENST00000590740 ZEB1P37275 1124 aaPredicted RBP12.4□□□□□ -0.42
AC060780.1-202ENST00000590740 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
AC060780.1-202ENST00000590740 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
AC060780.1-202ENST00000590740 NEFLP07196 543 aa12.21□□□□□ -0.45
AC060780.1-202ENST00000590740 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
AC060780.1-202ENST00000590740 MYT1Q01538 1121 aa12.18□□□□□ -0.46
AC060780.1-202ENST00000590740 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
AC060780.1-202ENST00000590740 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
AC060780.1-202ENST00000590740 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
AC060780.1-202ENST00000590740 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
AC060780.1-202ENST00000590740 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
AC060780.1-202ENST00000590740 HRCP23327 699 aa11.86□□□□□ -0.51
AC060780.1-202ENST00000590740 ITGAEP38570 1179 aa11.8□□□□□ -0.52
AC060780.1-202ENST00000590740 POLR3GLQ9BT43 218 aa11.8□□□□□ -0.52
AC060780.1-202ENST00000590740 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
AC060780.1-202ENST00000590740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
AC060780.1-202ENST00000590740 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
AC060780.1-202ENST00000590740 MYT1LQ9UL68 1186 aa11.74□□□□□ -0.53
AC060780.1-202ENST00000590740 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
AC060780.1-202ENST00000590740 CNGB1Q14028 1251 aaPredicted RBP11.67□□□□□ -0.54
AC060780.1-202ENST00000590740 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
AC060780.1-202ENST00000590740 CHIC1Q5VXU3 224 aa11.64□□□□□ -0.55
AC060780.1-202ENST00000590740 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
AC060780.1-202ENST00000590740 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
AC060780.1-202ENST00000590740 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
AC060780.1-202ENST00000590740 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
AC060780.1-202ENST00000590740 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
AC060780.1-202ENST00000590740 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
AC060780.1-202ENST00000590740 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
AC060780.1-202ENST00000590740 BCANQ96GW7 911 aa11.41□□□□□ -0.58
AC060780.1-202ENST00000590740 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
AC060780.1-202ENST00000590740 ANP32CO43423 234 aa11.4□□□□□ -0.59
AC060780.1-202ENST00000590740 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
AC060780.1-202ENST00000590740 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
AC060780.1-202ENST00000590740 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
AC060780.1-202ENST00000590740 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.6
AC060780.1-202ENST00000590740 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
AC060780.1-202ENST00000590740 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
AC060780.1-202ENST00000590740 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
AC060780.1-202ENST00000590740 NEFMP07197 916 aa11.22□□□□□ -0.61
AC060780.1-202ENST00000590740 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.61
AC060780.1-202ENST00000590740 BCL11AQ9H165 835 aa11.19□□□□□ -0.62
AC060780.1-202ENST00000590740 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
AC060780.1-202ENST00000590740 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.621e-5■□□□□ 8.6
AC060780.1-202ENST00000590740 FBLN2P98095 1184 aa11.13□□□□□ -0.63
AC060780.1-202ENST00000590740 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
AC060780.1-202ENST00000590740 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
AC060780.1-202ENST00000590740 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
AC060780.1-202ENST00000590740 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
AC060780.1-202ENST00000590740 FKBP8Q14318 412 aa11.07□□□□□ -0.64
AC060780.1-202ENST00000590740 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
AC060780.1-202ENST00000590740 EIF5BO60841 1220 aaKnown RBP11.05□□□□□ -0.64
AC060780.1-202ENST00000590740 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
AC060780.1-202ENST00000590740 HSP90AA1P07900 732 aaKnown RBP11.05□□□□□ -0.64
AC060780.1-202ENST00000590740 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
AC060780.1-202ENST00000590740 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
AC060780.1-202ENST00000590740 ABCC9O60706 1549 aa11.03□□□□□ -0.64
AC060780.1-202ENST00000590740 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC060780.1-202ENST00000590740 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
AC060780.1-202ENST00000590740 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
AC060780.1-202ENST00000590740 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
AC060780.1-202ENST00000590740 CCDC136Q96JN2 1154 aa10.95□□□□□ -0.66
AC060780.1-202ENST00000590740 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
AC060780.1-202ENST00000590740 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.94□□□□□ -0.66
AC060780.1-202ENST00000590740 ESF1Q9H501 851 aaKnown RBP10.94□□□□□ -0.66
AC060780.1-202ENST00000590740 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
AC060780.1-202ENST00000590740 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
AC060780.1-202ENST00000590740 NACADO15069 1562 aa10.93□□□□□ -0.66
AC060780.1-202ENST00000590740 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
AC060780.1-202ENST00000590740 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
AC060780.1-202ENST00000590740 NBR1Q14596 966 aa10.89□□□□□ -0.67
AC060780.1-202ENST00000590740 WDR43Q15061 677 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC060780.1-202ENST00000590740 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
AC060780.1-202ENST00000590740 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
AC060780.1-202ENST00000590740 ARXQ96QS3 562 aa10.84□□□□□ -0.67
AC060780.1-202ENST00000590740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.68
AC060780.1-202ENST00000590740 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
AC060780.1-202ENST00000590740 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
AC060780.1-202ENST00000590740 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
AC060780.1-202ENST00000590740 RB1CC1Q8TDY2 1594 aa10.8□□□□□ -0.68
AC060780.1-202ENST00000590740 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
AC060780.1-202ENST00000590740 MIER1Q8N108 512 aa10.79□□□□□ -0.68
AC060780.1-202ENST00000590740 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
AC060780.1-202ENST00000590740 IRX6P78412 446 aaPredicted RBP10.78□□□□□ -0.68
AC060780.1-202ENST00000590740 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
AC060780.1-202ENST00000590740 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
AC060780.1-202ENST00000590740 BECN1Q14457 450 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms