RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
KCNS3-202ENST00000403915 MYT1Q01538 1121 aa16.94■□□□□ 0.3
KCNS3-202ENST00000403915 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
KCNS3-202ENST00000403915 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
KCNS3-202ENST00000403915 SLC24A1O60721 1099 aa16.02■□□□□ 0.15
KCNS3-202ENST00000403915 ERICH6Q7L0X2 663 aa15.78■□□□□ 0.12
KCNS3-202ENST00000403915 APLP2Q06481 763 aa15.78■□□□□ 0.12
KCNS3-202ENST00000403915 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
KCNS3-202ENST00000403915 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
KCNS3-202ENST00000403915 HRCP23327 699 aa15.43■□□□□ 0.06
KCNS3-202ENST00000403915 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
KCNS3-202ENST00000403915 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
KCNS3-202ENST00000403915 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
KCNS3-202ENST00000403915 ABCC9O60706 1549 aa15.09■□□□□ 0.01
KCNS3-202ENST00000403915 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
KCNS3-202ENST00000403915 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
KCNS3-202ENST00000403915 PPARGC1BQ86YN6 1023 aaKnown RBP14.97□□□□□ -0.01
KCNS3-202ENST00000403915 CENPBP07199 599 aaPredicted RBP14.91□□□□□ -0.02
KCNS3-202ENST00000403915 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
KCNS3-202ENST00000403915 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
KCNS3-202ENST00000403915 ANP32EQ9BTT0 268 aa14.58□□□□□ -0.08
KCNS3-202ENST00000403915 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
KCNS3-202ENST00000403915 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
KCNS3-202ENST00000403915 GTF3C3Q9Y5Q9 886 aa14.51□□□□□ -0.09
KCNS3-202ENST00000403915 UBE2Q2Q8WVN8 375 aa14.47□□□□□ -0.09
KCNS3-202ENST00000403915 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
KCNS3-202ENST00000403915 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
KCNS3-202ENST00000403915 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
KCNS3-202ENST00000403915 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
KCNS3-202ENST00000403915 PODXL2Q9NZ53 605 aa14.34□□□□□ -0.11
KCNS3-202ENST00000403915 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
KCNS3-202ENST00000403915 PKNOX2Q96KN3 472 aa14.17□□□□□ -0.14
KCNS3-202ENST00000403915 ZEB1P37275 1124 aaPredicted RBP14.14□□□□□ -0.15
KCNS3-202ENST00000403915 NCBP3Q53F19 620 aaKnown RBP14.11□□□□□ -0.15
KCNS3-202ENST00000403915 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
KCNS3-202ENST00000403915 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.16
KCNS3-202ENST00000403915 NACADO15069 1562 aa14.01□□□□□ -0.17
KCNS3-202ENST00000403915 CUX2O14529 1486 aa13.99□□□□□ -0.17
KCNS3-202ENST00000403915 CCDC136Q96JN2 1154 aa13.98□□□□□ -0.17
KCNS3-202ENST00000403915 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
KCNS3-202ENST00000403915 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
KCNS3-202ENST00000403915 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
KCNS3-202ENST00000403915 ARXQ96QS3 562 aa13.86□□□□□ -0.19
KCNS3-202ENST00000403915 NEFLP07196 543 aa13.82□□□□□ -0.2
KCNS3-202ENST00000403915 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
KCNS3-202ENST00000403915 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
KCNS3-202ENST00000403915 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
KCNS3-202ENST00000403915 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
KCNS3-202ENST00000403915 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
KCNS3-202ENST00000403915 PDE4CQ08493 712 aa13.79□□□□□ -0.2
KCNS3-202ENST00000403915 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
KCNS3-202ENST00000403915 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
KCNS3-202ENST00000403915 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
KCNS3-202ENST00000403915 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
KCNS3-202ENST00000403915 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
KCNS3-202ENST00000403915 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
KCNS3-202ENST00000403915 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
KCNS3-202ENST00000403915 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
KCNS3-202ENST00000403915 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
KCNS3-202ENST00000403915 FGD1P98174 961 aa13.61□□□□□ -0.23
KCNS3-202ENST00000403915 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
KCNS3-202ENST00000403915 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
KCNS3-202ENST00000403915 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
KCNS3-202ENST00000403915 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
KCNS3-202ENST00000403915 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
KCNS3-202ENST00000403915 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
KCNS3-202ENST00000403915 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
KCNS3-202ENST00000403915 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
KCNS3-202ENST00000403915 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
KCNS3-202ENST00000403915 AAMPQ13685 434 aa13.46□□□□□ -0.25
KCNS3-202ENST00000403915 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
KCNS3-202ENST00000403915 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.26
KCNS3-202ENST00000403915 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.26
KCNS3-202ENST00000403915 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
KCNS3-202ENST00000403915 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
KCNS3-202ENST00000403915 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
KCNS3-202ENST00000403915 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
KCNS3-202ENST00000403915 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
KCNS3-202ENST00000403915 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
KCNS3-202ENST00000403915 MSH5O43196 834 aa13.37□□□□□ -0.27
KCNS3-202ENST00000403915 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
KCNS3-202ENST00000403915 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
KCNS3-202ENST00000403915 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
KCNS3-202ENST00000403915 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
KCNS3-202ENST00000403915 ERCC6Q03468 1493 aa13.27□□□□□ -0.28
KCNS3-202ENST00000403915 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
KCNS3-202ENST00000403915 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
KCNS3-202ENST00000403915 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
KCNS3-202ENST00000403915 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
KCNS3-202ENST00000403915 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
KCNS3-202ENST00000403915 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
KCNS3-202ENST00000403915 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
KCNS3-202ENST00000403915 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
KCNS3-202ENST00000403915 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
KCNS3-202ENST00000403915 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
KCNS3-202ENST00000403915 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
KCNS3-202ENST00000403915 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
KCNS3-202ENST00000403915 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
KCNS3-202ENST00000403915 MIER1Q8N108 512 aa13.02□□□□□ -0.32
KCNS3-202ENST00000403915 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms