RNA–Protein interactions for RNA: ENST00000318249.9

NBPF3-202, Transcript of NBPF member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBPF3, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-202ENST00000318249 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
NBPF3-202ENST00000318249 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
NBPF3-202ENST00000318249 ABCC9O60706 1549 aa13.11□□□□□ -0.31
NBPF3-202ENST00000318249 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
NBPF3-202ENST00000318249 MYT1Q01538 1121 aa12.86□□□□□ -0.35
NBPF3-202ENST00000318249 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
NBPF3-202ENST00000318249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
NBPF3-202ENST00000318249 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
NBPF3-202ENST00000318249 TTBK1Q5TCY1 1321 aaPredicted RBP12.36□□□□□ -0.43
NBPF3-202ENST00000318249 HRCP23327 699 aa12.32□□□□□ -0.44
NBPF3-202ENST00000318249 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
NBPF3-202ENST00000318249 ZCCHC6Q5VYS8 1495 aaKnown RBP12.26□□□□□ -0.45
NBPF3-202ENST00000318249 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
NBPF3-202ENST00000318249 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
NBPF3-202ENST00000318249 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
NBPF3-202ENST00000318249 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
NBPF3-202ENST00000318249 NACADO15069 1562 aa11.93□□□□□ -0.5
NBPF3-202ENST00000318249 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
NBPF3-202ENST00000318249 PPARGC1BQ86YN6 1023 aaKnown RBP11.84□□□□□ -0.51
NBPF3-202ENST00000318249 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
NBPF3-202ENST00000318249 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
NBPF3-202ENST00000318249 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
NBPF3-202ENST00000318249 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
NBPF3-202ENST00000318249 APLP2Q06481 763 aa11.66□□□□□ -0.54
NBPF3-202ENST00000318249 FAM9AQ8IZU1 332 aaPredicted RBP11.59□□□□□ -0.55
NBPF3-202ENST00000318249 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
NBPF3-202ENST00000318249 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
NBPF3-202ENST00000318249 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
NBPF3-202ENST00000318249 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
NBPF3-202ENST00000318249 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.56
NBPF3-202ENST00000318249 RSF1Q96T23 1441 aaPredicted RBP11.5□□□□□ -0.57
NBPF3-202ENST00000318249 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
NBPF3-202ENST00000318249 CHIC1Q5VXU3 224 aa11.45□□□□□ -0.58
NBPF3-202ENST00000318249 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
NBPF3-202ENST00000318249 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
NBPF3-202ENST00000318249 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
NBPF3-202ENST00000318249 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
NBPF3-202ENST00000318249 EIF4G1Q04637 1599 aaKnown RBP11.42□□□□□ -0.58
NBPF3-202ENST00000318249 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
NBPF3-202ENST00000318249 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
NBPF3-202ENST00000318249 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
NBPF3-202ENST00000318249 WIZO95785 1651 aa11.37□□□□□ -0.59
NBPF3-202ENST00000318249 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
NBPF3-202ENST00000318249 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
NBPF3-202ENST00000318249 ANP32EQ9BTT0 268 aa11.29□□□□□ -0.6
NBPF3-202ENST00000318249 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
NBPF3-202ENST00000318249 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.6
NBPF3-202ENST00000318249 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
NBPF3-202ENST00000318249 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
NBPF3-202ENST00000318249 FBLN2P98095 1184 aa11.21□□□□□ -0.61
NBPF3-202ENST00000318249 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
NBPF3-202ENST00000318249 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
NBPF3-202ENST00000318249 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
NBPF3-202ENST00000318249 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
NBPF3-202ENST00000318249 NESP48681 1621 aa11.12□□□□□ -0.63
NBPF3-202ENST00000318249 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
NBPF3-202ENST00000318249 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
NBPF3-202ENST00000318249 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
NBPF3-202ENST00000318249 TOP2AP11388 1531 aaKnown RBP11.1□□□□□ -0.63
NBPF3-202ENST00000318249 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
NBPF3-202ENST00000318249 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
NBPF3-202ENST00000318249 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
NBPF3-202ENST00000318249 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
NBPF3-202ENST00000318249 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
NBPF3-202ENST00000318249 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
NBPF3-202ENST00000318249 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
NBPF3-202ENST00000318249 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
NBPF3-202ENST00000318249 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
NBPF3-202ENST00000318249 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
NBPF3-202ENST00000318249 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
NBPF3-202ENST00000318249 CUX2O14529 1486 aa10.89□□□□□ -0.67
NBPF3-202ENST00000318249 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
NBPF3-202ENST00000318249 DIEXFQ68CQ4 756 aaKnown RBP10.89□□□□□ -0.67
NBPF3-202ENST00000318249 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
NBPF3-202ENST00000318249 SOGA1O94964 1423 aa10.88□□□□□ -0.67
NBPF3-202ENST00000318249 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
NBPF3-202ENST00000318249 TSHZ2Q9NRE2 1034 aa10.88□□□□□ -0.67
NBPF3-202ENST00000318249 PEG3Q9GZU2 1588 aa10.87□□□□□ -0.67
NBPF3-202ENST00000318249 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
NBPF3-202ENST00000318249 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
NBPF3-202ENST00000318249 FANCD2Q9BXW9 1451 aa10.86□□□□□ -0.67
NBPF3-202ENST00000318249 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
NBPF3-202ENST00000318249 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
NBPF3-202ENST00000318249 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
NBPF3-202ENST00000318249 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
NBPF3-202ENST00000318249 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.69
NBPF3-202ENST00000318249 LAMC3Q9Y6N6 1575 aa10.76□□□□□ -0.69
NBPF3-202ENST00000318249 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
NBPF3-202ENST00000318249 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
NBPF3-202ENST00000318249 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
NBPF3-202ENST00000318249 CFTRP13569 1480 aa10.72□□□□□ -0.69
NBPF3-202ENST00000318249 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
NBPF3-202ENST00000318249 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
NBPF3-202ENST00000318249 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
NBPF3-202ENST00000318249 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
NBPF3-202ENST00000318249 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.7
NBPF3-202ENST00000318249 CUX1P39880 1505 aa10.67□□□□□ -0.7
NBPF3-202ENST00000318249 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
NBPF3-202ENST00000318249 RAD54L2Q9Y4B4 1467 aa10.64□□□□□ -0.71
NBPF3-202ENST00000318249 YTHDC1Q96MU7 727 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms