RNA–Protein interactions for RNA: ENST00000577538.5

ZNF407-203, Transcript of zinc finger protein 407, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF407, Length 5,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-203ENST00000577538 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
ZNF407-203ENST00000577538 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
ZNF407-203ENST00000577538 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
ZNF407-203ENST00000577538 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
ZNF407-203ENST00000577538 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
ZNF407-203ENST00000577538 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
ZNF407-203ENST00000577538 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
ZNF407-203ENST00000577538 PCGF6Q9BYE7 350 aa12.1□□□□□ -0.47
ZNF407-203ENST00000577538 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
ZNF407-203ENST00000577538 APLP2Q06481 763 aa11.91□□□□□ -0.5
ZNF407-203ENST00000577538 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
ZNF407-203ENST00000577538 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
ZNF407-203ENST00000577538 RANGAP1P46060 587 aaPredicted RBP11.81□□□□□ -0.52
ZNF407-203ENST00000577538 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
ZNF407-203ENST00000577538 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
ZNF407-203ENST00000577538 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
ZNF407-203ENST00000577538 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
ZNF407-203ENST00000577538 ATP1B4Q9UN42 357 aaPredicted RBP11.59□□□□□ -0.55
ZNF407-203ENST00000577538 TRIM41Q8WV44 630 aa11.58□□□□□ -0.55
ZNF407-203ENST00000577538 NEFLP07196 543 aa11.53□□□□□ -0.56
ZNF407-203ENST00000577538 MYT1Q01538 1121 aa11.5□□□□□ -0.57
ZNF407-203ENST00000577538 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
ZNF407-203ENST00000577538 HRCP23327 699 aa11.42□□□□□ -0.58
ZNF407-203ENST00000577538 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
ZNF407-203ENST00000577538 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
ZNF407-203ENST00000577538 CNGB1Q14028 1251 aaPredicted RBP11.32□□□□□ -0.6
ZNF407-203ENST00000577538 ITGAEP38570 1179 aa11.31□□□□□ -0.6
ZNF407-203ENST00000577538 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
ZNF407-203ENST00000577538 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
ZNF407-203ENST00000577538 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
ZNF407-203ENST00000577538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
ZNF407-203ENST00000577538 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
ZNF407-203ENST00000577538 BCANQ96GW7 911 aa11.11□□□□□ -0.63
ZNF407-203ENST00000577538 CHIC1Q5VXU3 224 aa11.11□□□□□ -0.63
ZNF407-203ENST00000577538 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
ZNF407-203ENST00000577538 RTL5Q5HYW3 569 aaPredicted RBP11.04□□□□□ -0.64
ZNF407-203ENST00000577538 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.64
ZNF407-203ENST00000577538 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
ZNF407-203ENST00000577538 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
ZNF407-203ENST00000577538 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
ZNF407-203ENST00000577538 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
ZNF407-203ENST00000577538 FAM50AQ14320 339 aaKnown RBP10.89□□□□□ -0.67
ZNF407-203ENST00000577538 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
ZNF407-203ENST00000577538 TRIM52Q96A61 297 aa10.83□□□□□ -0.68
ZNF407-203ENST00000577538 ACIN1Q9UKV3 1341 aaKnown RBP10.82□□□□□ -0.68
ZNF407-203ENST00000577538 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
ZNF407-203ENST00000577538 ZNF326Q5BKZ1 582 aaKnown RBP10.8□□□□□ -0.68
ZNF407-203ENST00000577538 ANP32CO43423 234 aa10.78□□□□□ -0.68
ZNF407-203ENST00000577538 NPM2Q86SE8 214 aaKnown RBP10.74□□□□□ -0.69
ZNF407-203ENST00000577538 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
ZNF407-203ENST00000577538 FKBP8Q14318 412 aa10.67□□□□□ -0.7
ZNF407-203ENST00000577538 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
ZNF407-203ENST00000577538 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
ZNF407-203ENST00000577538 ABCC9O60706 1549 aa10.63□□□□□ -0.71
ZNF407-203ENST00000577538 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
ZNF407-203ENST00000577538 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
ZNF407-203ENST00000577538 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
ZNF407-203ENST00000577538 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
ZNF407-203ENST00000577538 NBR1Q14596 966 aa10.6□□□□□ -0.71
ZNF407-203ENST00000577538 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
ZNF407-203ENST00000577538 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
ZNF407-203ENST00000577538 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
ZNF407-203ENST00000577538 ARXQ96QS3 562 aa10.54□□□□□ -0.72
ZNF407-203ENST00000577538 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
ZNF407-203ENST00000577538 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
ZNF407-203ENST00000577538 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.72
ZNF407-203ENST00000577538 IRX6P78412 446 aaPredicted RBP10.52□□□□□ -0.73
ZNF407-203ENST00000577538 FBLN2P98095 1184 aa10.48□□□□□ -0.73
ZNF407-203ENST00000577538 ZNF777Q9ULD5 760 aaPredicted RBP10.46□□□□□ -0.73
ZNF407-203ENST00000577538 MIER1Q8N108 512 aa10.46□□□□□ -0.74
ZNF407-203ENST00000577538 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
ZNF407-203ENST00000577538 HSP90AA1P07900 732 aaKnown RBP10.44□□□□□ -0.74
ZNF407-203ENST00000577538 CSRNP3Q8WYN3 585 aa10.42□□□□□ -0.74
ZNF407-203ENST00000577538 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
ZNF407-203ENST00000577538 NEFMP07197 916 aa10.41□□□□□ -0.74
ZNF407-203ENST00000577538 ANP32BQ92688 251 aaKnown RBP10.41□□□□□ -0.74
ZNF407-203ENST00000577538 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
ZNF407-203ENST00000577538 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
ZNF407-203ENST00000577538 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
ZNF407-203ENST00000577538 CHIC2Q9UKJ5 165 aa10.34□□□□□ -0.75
ZNF407-203ENST00000577538 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
ZNF407-203ENST00000577538 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
ZNF407-203ENST00000577538 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
ZNF407-203ENST00000577538 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
ZNF407-203ENST00000577538 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
ZNF407-203ENST00000577538 DCAF1Q9Y4B6 1507 aa10.31□□□□□ -0.76
ZNF407-203ENST00000577538 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
ZNF407-203ENST00000577538 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
ZNF407-203ENST00000577538 PLPPR3Q6T4P5 718 aa10.28□□□□□ -0.76
ZNF407-203ENST00000577538 ANP32EQ9BTT0 268 aa10.27□□□□□ -0.77
ZNF407-203ENST00000577538 SENP3Q9H4L4 574 aaPredicted RBP10.26□□□□□ -0.77
ZNF407-203ENST00000577538 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
ZNF407-203ENST00000577538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.26□□□□□ -0.775e-7■■□□□ 12.5
ZNF407-203ENST00000577538 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
ZNF407-203ENST00000577538 WDR43Q15061 677 aaKnown RBP eCLIP10.24□□□□□ -0.77
ZNF407-203ENST00000577538 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
ZNF407-203ENST00000577538 MYO15BQ96JP2 1530 aa10.22□□□□□ -0.77
ZNF407-203ENST00000577538 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.77
ZNF407-203ENST00000577538 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.78
ZNF407-203ENST00000577538 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms