RNA–Protein interactions for RNA: ENST00000297436.2

DEFA6-201, Transcript of defensin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFA6, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA6-201ENST00000297436 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
DEFA6-201ENST00000297436 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
DEFA6-201ENST00000297436 ABCC9O60706 1549 aa13.93□□□□□ -0.18
DEFA6-201ENST00000297436 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
DEFA6-201ENST00000297436 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
DEFA6-201ENST00000297436 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
DEFA6-201ENST00000297436 NACADO15069 1562 aa13.31□□□□□ -0.28
DEFA6-201ENST00000297436 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
DEFA6-201ENST00000297436 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
DEFA6-201ENST00000297436 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
DEFA6-201ENST00000297436 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
DEFA6-201ENST00000297436 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
DEFA6-201ENST00000297436 HRCP23327 699 aa13.08□□□□□ -0.32
DEFA6-201ENST00000297436 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
DEFA6-201ENST00000297436 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
DEFA6-201ENST00000297436 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
DEFA6-201ENST00000297436 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
DEFA6-201ENST00000297436 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
DEFA6-201ENST00000297436 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
DEFA6-201ENST00000297436 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
DEFA6-201ENST00000297436 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
DEFA6-201ENST00000297436 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
DEFA6-201ENST00000297436 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
DEFA6-201ENST00000297436 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
DEFA6-201ENST00000297436 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
DEFA6-201ENST00000297436 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
DEFA6-201ENST00000297436 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
DEFA6-201ENST00000297436 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
DEFA6-201ENST00000297436 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
DEFA6-201ENST00000297436 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
DEFA6-201ENST00000297436 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
DEFA6-201ENST00000297436 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
DEFA6-201ENST00000297436 WIZO95785 1651 aa12.23□□□□□ -0.45
DEFA6-201ENST00000297436 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
DEFA6-201ENST00000297436 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
DEFA6-201ENST00000297436 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
DEFA6-201ENST00000297436 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
DEFA6-201ENST00000297436 SMARCA4P51532 1647 aa12.18□□□□□ -0.46
DEFA6-201ENST00000297436 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
DEFA6-201ENST00000297436 CUX2O14529 1486 aa12.17□□□□□ -0.46
DEFA6-201ENST00000297436 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
DEFA6-201ENST00000297436 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
DEFA6-201ENST00000297436 EEA1Q15075 1411 aa12.14□□□□□ -0.47
DEFA6-201ENST00000297436 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
DEFA6-201ENST00000297436 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
DEFA6-201ENST00000297436 TNIKQ9UKE5 1360 aa12.05□□□□□ -0.48
DEFA6-201ENST00000297436 ERCC6Q03468 1493 aa12.02□□□□□ -0.48
DEFA6-201ENST00000297436 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
DEFA6-201ENST00000297436 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
DEFA6-201ENST00000297436 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
DEFA6-201ENST00000297436 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
DEFA6-201ENST00000297436 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
DEFA6-201ENST00000297436 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
DEFA6-201ENST00000297436 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
DEFA6-201ENST00000297436 NESP48681 1621 aa11.97□□□□□ -0.49
DEFA6-201ENST00000297436 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
DEFA6-201ENST00000297436 CENPBP07199 599 aaPredicted RBP11.96□□□□□ -0.49
DEFA6-201ENST00000297436 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
DEFA6-201ENST00000297436 KIF21BO75037 1637 aa11.93□□□□□ -0.5
DEFA6-201ENST00000297436 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
DEFA6-201ENST00000297436 MYT1Q01538 1121 aa11.92□□□□□ -0.5
DEFA6-201ENST00000297436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
DEFA6-201ENST00000297436 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
DEFA6-201ENST00000297436 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
DEFA6-201ENST00000297436 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
DEFA6-201ENST00000297436 SOGA1O94964 1423 aa11.88□□□□□ -0.51
DEFA6-201ENST00000297436 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
DEFA6-201ENST00000297436 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
DEFA6-201ENST00000297436 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
DEFA6-201ENST00000297436 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
DEFA6-201ENST00000297436 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
DEFA6-201ENST00000297436 WDR62O43379 1518 aa11.81□□□□□ -0.52
DEFA6-201ENST00000297436 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
DEFA6-201ENST00000297436 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
DEFA6-201ENST00000297436 MRC2Q9UBG0 1479 aa11.76□□□□□ -0.53
DEFA6-201ENST00000297436 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
DEFA6-201ENST00000297436 CLSPNQ9HAW4 1339 aa11.76□□□□□ -0.53
DEFA6-201ENST00000297436 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
DEFA6-201ENST00000297436 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
DEFA6-201ENST00000297436 CLIP1P30622 1438 aa11.75□□□□□ -0.53
DEFA6-201ENST00000297436 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
DEFA6-201ENST00000297436 CFTRP13569 1480 aa11.73□□□□□ -0.53
DEFA6-201ENST00000297436 ERICH3Q5RHP9 1530 aa11.72□□□□□ -0.53
DEFA6-201ENST00000297436 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
DEFA6-201ENST00000297436 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.54
DEFA6-201ENST00000297436 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
DEFA6-201ENST00000297436 APLP2Q06481 763 aa11.63□□□□□ -0.55
DEFA6-201ENST00000297436 RAPGEF2Q9Y4G8 1499 aa11.63□□□□□ -0.55
DEFA6-201ENST00000297436 PRXQ9BXM0 1461 aa11.61□□□□□ -0.55
DEFA6-201ENST00000297436 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
DEFA6-201ENST00000297436 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
DEFA6-201ENST00000297436 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
DEFA6-201ENST00000297436 MIER1Q8N108 512 aa11.56□□□□□ -0.56
DEFA6-201ENST00000297436 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
DEFA6-201ENST00000297436 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
DEFA6-201ENST00000297436 MAP3K1Q13233 1512 aa11.54□□□□□ -0.56
DEFA6-201ENST00000297436 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
DEFA6-201ENST00000297436 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
DEFA6-201ENST00000297436 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
DEFA6-201ENST00000297436 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms