Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AP001521.1-201ENST00000609150 300 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC245517.5-201ENST00000611529 162 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AL450472.3-201ENST00000615578 367 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC024257.4-201ENST00000618746 458 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV2-40-202ENST00000621595 312 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073592.9-201ENST00000624885 371 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORD3D-202ENST00000630092 217 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AL355480.3-201ENST00000630128 96 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC132825.8-201ENST00000640783 297 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 C3orf52-201ENST00000264848 2277 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AL031590.1-203ENST00000642075 2747 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC36A3-202ENST00000377713 1720 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM75-201ENST00000624314 2165 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PARP6-202ENST00000287196 2625 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AC023449.2-201ENST00000620538 2400 ntBASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 GPR55-201ENST00000392039 1523 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 RFX6-201ENST00000332958 3460 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MROH5-201ENST00000430863 4164 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ERMARD-203ENST00000366773 2141 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGEF3-202ENST00000338458 3639 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 KCNE1B-202ENST00000618699 3154 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 IRGM-202ENST00000522154 1659 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-4Q9BYR3 EFCAB11-208ENST00000555872 2716 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SAMMSON-222ENST00000641901 2727 ntBASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-4Q9BYR3 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms