RNA–Protein interactions for RNA: ENST00000399003.1

AP002358.1-201, humanhuman

TSL 2 BASIC

Gene AP002358.1, Length 2,805 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002358.1-201ENST00000399003 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
AP002358.1-201ENST00000399003 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
AP002358.1-201ENST00000399003 ZCCHC6Q5VYS8 1495 aaKnown RBP14.83□□□□□ -0.04
AP002358.1-201ENST00000399003 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
AP002358.1-201ENST00000399003 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
AP002358.1-201ENST00000399003 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
AP002358.1-201ENST00000399003 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
AP002358.1-201ENST00000399003 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
AP002358.1-201ENST00000399003 ABCC9O60706 1549 aa14.05□□□□□ -0.16
AP002358.1-201ENST00000399003 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
AP002358.1-201ENST00000399003 HRCP23327 699 aa14.03□□□□□ -0.16
AP002358.1-201ENST00000399003 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
AP002358.1-201ENST00000399003 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
AP002358.1-201ENST00000399003 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
AP002358.1-201ENST00000399003 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
AP002358.1-201ENST00000399003 NACADO15069 1562 aa13.71□□□□□ -0.21
AP002358.1-201ENST00000399003 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
AP002358.1-201ENST00000399003 MYT1Q01538 1121 aa13.62□□□□□ -0.23
AP002358.1-201ENST00000399003 PPARGC1BQ86YN6 1023 aaKnown RBP13.59□□□□□ -0.23
AP002358.1-201ENST00000399003 TRIM26Q12899 539 aaPredicted RBP13.59□□□□□ -0.23
AP002358.1-201ENST00000399003 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
AP002358.1-201ENST00000399003 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
AP002358.1-201ENST00000399003 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
AP002358.1-201ENST00000399003 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
AP002358.1-201ENST00000399003 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
AP002358.1-201ENST00000399003 WIZO95785 1651 aa13.44□□□□□ -0.26
AP002358.1-201ENST00000399003 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
AP002358.1-201ENST00000399003 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
AP002358.1-201ENST00000399003 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
AP002358.1-201ENST00000399003 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
AP002358.1-201ENST00000399003 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
AP002358.1-201ENST00000399003 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
AP002358.1-201ENST00000399003 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
AP002358.1-201ENST00000399003 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
AP002358.1-201ENST00000399003 CCDC88BA6NC98 1476 aa13.15□□□□□ -0.3
AP002358.1-201ENST00000399003 EEA1Q15075 1411 aa13.14□□□□□ -0.31
AP002358.1-201ENST00000399003 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
AP002358.1-201ENST00000399003 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
AP002358.1-201ENST00000399003 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
AP002358.1-201ENST00000399003 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
AP002358.1-201ENST00000399003 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
AP002358.1-201ENST00000399003 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
AP002358.1-201ENST00000399003 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
AP002358.1-201ENST00000399003 KIF21BO75037 1637 aa13□□□□□ -0.33
AP002358.1-201ENST00000399003 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
AP002358.1-201ENST00000399003 SOGA1O94964 1423 aa12.96□□□□□ -0.33
AP002358.1-201ENST00000399003 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
AP002358.1-201ENST00000399003 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
AP002358.1-201ENST00000399003 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
AP002358.1-201ENST00000399003 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
AP002358.1-201ENST00000399003 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
AP002358.1-201ENST00000399003 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
AP002358.1-201ENST00000399003 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
AP002358.1-201ENST00000399003 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
AP002358.1-201ENST00000399003 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
AP002358.1-201ENST00000399003 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
AP002358.1-201ENST00000399003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
AP002358.1-201ENST00000399003 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
AP002358.1-201ENST00000399003 ATAD2BQ9ULI0 1458 aa12.83□□□□□ -0.36
AP002358.1-201ENST00000399003 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
AP002358.1-201ENST00000399003 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
AP002358.1-201ENST00000399003 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
AP002358.1-201ENST00000399003 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
AP002358.1-201ENST00000399003 ERICH3Q5RHP9 1530 aa12.77□□□□□ -0.37
AP002358.1-201ENST00000399003 CLIP1P30622 1438 aa12.75□□□□□ -0.37
AP002358.1-201ENST00000399003 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
AP002358.1-201ENST00000399003 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
AP002358.1-201ENST00000399003 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
AP002358.1-201ENST00000399003 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
AP002358.1-201ENST00000399003 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
AP002358.1-201ENST00000399003 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
AP002358.1-201ENST00000399003 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
AP002358.1-201ENST00000399003 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
AP002358.1-201ENST00000399003 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
AP002358.1-201ENST00000399003 NCAPD3P42695 1498 aa12.61□□□□□ -0.39
AP002358.1-201ENST00000399003 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
AP002358.1-201ENST00000399003 CUX2O14529 1486 aa12.58□□□□□ -0.4
AP002358.1-201ENST00000399003 CUX1P39880 1505 aa12.57□□□□□ -0.4
AP002358.1-201ENST00000399003 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
AP002358.1-201ENST00000399003 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
AP002358.1-201ENST00000399003 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
AP002358.1-201ENST00000399003 CFTRP13569 1480 aa12.53□□□□□ -0.4
AP002358.1-201ENST00000399003 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
AP002358.1-201ENST00000399003 APLP2Q06481 763 aa12.51□□□□□ -0.41
AP002358.1-201ENST00000399003 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
AP002358.1-201ENST00000399003 DHX57Q6P158 1386 aaKnown RBP12.48□□□□□ -0.41
AP002358.1-201ENST00000399003 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
AP002358.1-201ENST00000399003 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
AP002358.1-201ENST00000399003 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
AP002358.1-201ENST00000399003 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
AP002358.1-201ENST00000399003 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
AP002358.1-201ENST00000399003 MIER1Q8N108 512 aa12.41□□□□□ -0.42
AP002358.1-201ENST00000399003 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
AP002358.1-201ENST00000399003 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
AP002358.1-201ENST00000399003 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
AP002358.1-201ENST00000399003 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
AP002358.1-201ENST00000399003 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
AP002358.1-201ENST00000399003 IGF1RP08069 1367 aa12.32□□□□□ -0.44
AP002358.1-201ENST00000399003 LRRC9Q6ZRR7 1453 aa12.31□□□□□ -0.44
AP002358.1-201ENST00000399003 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms