RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
TTC39A-212ENST00000447632 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
TTC39A-212ENST00000447632 ABCC9O60706 1549 aa16.97■□□□□ 0.31
TTC39A-212ENST00000447632 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
TTC39A-212ENST00000447632 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
TTC39A-212ENST00000447632 NACADO15069 1562 aa16.22■□□□□ 0.19
TTC39A-212ENST00000447632 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
TTC39A-212ENST00000447632 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
TTC39A-212ENST00000447632 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.18
TTC39A-212ENST00000447632 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
TTC39A-212ENST00000447632 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
TTC39A-212ENST00000447632 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
TTC39A-212ENST00000447632 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
TTC39A-212ENST00000447632 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
TTC39A-212ENST00000447632 CECR2Q9BXF3 1484 aa15.5■□□□□ 0.07
TTC39A-212ENST00000447632 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
TTC39A-212ENST00000447632 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
TTC39A-212ENST00000447632 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
TTC39A-212ENST00000447632 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
TTC39A-212ENST00000447632 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-212ENST00000447632 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
TTC39A-212ENST00000447632 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
TTC39A-212ENST00000447632 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.03
TTC39A-212ENST00000447632 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
TTC39A-212ENST00000447632 WIZO95785 1651 aa15.12■□□□□ 0.01
TTC39A-212ENST00000447632 NCAPD3P42695 1498 aa15.06■□□□□ 0
TTC39A-212ENST00000447632 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
TTC39A-212ENST00000447632 SMARCA2P51531 1590 aa15.04■□□□□ -0
TTC39A-212ENST00000447632 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
TTC39A-212ENST00000447632 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
TTC39A-212ENST00000447632 TOP2AP11388 1531 aaKnown RBP14.88□□□□□ -0.03
TTC39A-212ENST00000447632 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
TTC39A-212ENST00000447632 NESP48681 1621 aa14.76□□□□□ -0.05
TTC39A-212ENST00000447632 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
TTC39A-212ENST00000447632 CFTRP13569 1480 aa14.62□□□□□ -0.07
TTC39A-212ENST00000447632 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
TTC39A-212ENST00000447632 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
TTC39A-212ENST00000447632 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
TTC39A-212ENST00000447632 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
TTC39A-212ENST00000447632 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
TTC39A-212ENST00000447632 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
TTC39A-212ENST00000447632 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
TTC39A-212ENST00000447632 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
TTC39A-212ENST00000447632 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
TTC39A-212ENST00000447632 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
TTC39A-212ENST00000447632 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
TTC39A-212ENST00000447632 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
TTC39A-212ENST00000447632 CUX1P39880 1505 aa14.3□□□□□ -0.12
TTC39A-212ENST00000447632 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
TTC39A-212ENST00000447632 FAM9AQ8IZU1 332 aaPredicted RBP14.26□□□□□ -0.13
TTC39A-212ENST00000447632 PRDM2Q13029 1718 aa14.26□□□□□ -0.13
TTC39A-212ENST00000447632 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
TTC39A-212ENST00000447632 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
TTC39A-212ENST00000447632 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
TTC39A-212ENST00000447632 SOGA1O94964 1423 aa14.24□□□□□ -0.13
TTC39A-212ENST00000447632 FGD5Q6ZNL6 1462 aa14.23□□□□□ -0.13
TTC39A-212ENST00000447632 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
TTC39A-212ENST00000447632 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
TTC39A-212ENST00000447632 WDR62O43379 1518 aa14.22□□□□□ -0.13
TTC39A-212ENST00000447632 POLA1P09884 1462 aaPredicted RBP14.21□□□□□ -0.13
TTC39A-212ENST00000447632 CUX2O14529 1486 aa14.19□□□□□ -0.14
TTC39A-212ENST00000447632 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
TTC39A-212ENST00000447632 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
TTC39A-212ENST00000447632 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
TTC39A-212ENST00000447632 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
TTC39A-212ENST00000447632 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
TTC39A-212ENST00000447632 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
TTC39A-212ENST00000447632 FBLN2P98095 1184 aa14.1□□□□□ -0.15
TTC39A-212ENST00000447632 BIVM-ERCC5R4GMW8 1640 aa14.09□□□□□ -0.15
TTC39A-212ENST00000447632 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
TTC39A-212ENST00000447632 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
TTC39A-212ENST00000447632 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
TTC39A-212ENST00000447632 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.16
TTC39A-212ENST00000447632 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
TTC39A-212ENST00000447632 IGF1RP08069 1367 aa14□□□□□ -0.17
TTC39A-212ENST00000447632 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
TTC39A-212ENST00000447632 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
TTC39A-212ENST00000447632 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
TTC39A-212ENST00000447632 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
TTC39A-212ENST00000447632 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
TTC39A-212ENST00000447632 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
TTC39A-212ENST00000447632 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
TTC39A-212ENST00000447632 HRCP23327 699 aa13.9□□□□□ -0.18
TTC39A-212ENST00000447632 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
TTC39A-212ENST00000447632 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
TTC39A-212ENST00000447632 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
TTC39A-212ENST00000447632 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
TTC39A-212ENST00000447632 EEA1Q15075 1411 aa13.84□□□□□ -0.19
TTC39A-212ENST00000447632 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
TTC39A-212ENST00000447632 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
TTC39A-212ENST00000447632 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-212ENST00000447632 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
TTC39A-212ENST00000447632 SYNJ2O15056 1496 aa13.81□□□□□ -0.2
TTC39A-212ENST00000447632 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
TTC39A-212ENST00000447632 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
TTC39A-212ENST00000447632 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
TTC39A-212ENST00000447632 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-212ENST00000447632 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
TTC39A-212ENST00000447632 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
TTC39A-212ENST00000447632 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms