RNA–Protein interactions for RNA: ENST00000399914.5

GRIK1-207, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 5 BASIC

Gene GRIK1, Length 3,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-207ENST00000399914 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
GRIK1-207ENST00000399914 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
GRIK1-207ENST00000399914 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
GRIK1-207ENST00000399914 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
GRIK1-207ENST00000399914 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
GRIK1-207ENST00000399914 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
GRIK1-207ENST00000399914 ABCC9O60706 1549 aa16.49■□□□□ 0.23
GRIK1-207ENST00000399914 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
GRIK1-207ENST00000399914 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
GRIK1-207ENST00000399914 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
GRIK1-207ENST00000399914 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
GRIK1-207ENST00000399914 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
GRIK1-207ENST00000399914 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
GRIK1-207ENST00000399914 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
GRIK1-207ENST00000399914 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
GRIK1-207ENST00000399914 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
GRIK1-207ENST00000399914 HRCP23327 699 aa15.76■□□□□ 0.11
GRIK1-207ENST00000399914 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
GRIK1-207ENST00000399914 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
GRIK1-207ENST00000399914 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
GRIK1-207ENST00000399914 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
GRIK1-207ENST00000399914 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
GRIK1-207ENST00000399914 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
GRIK1-207ENST00000399914 NACADO15069 1562 aa15.44■□□□□ 0.06
GRIK1-207ENST00000399914 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
GRIK1-207ENST00000399914 WIZO95785 1651 aa15.33■□□□□ 0.04
GRIK1-207ENST00000399914 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
GRIK1-207ENST00000399914 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
GRIK1-207ENST00000399914 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
GRIK1-207ENST00000399914 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
GRIK1-207ENST00000399914 CCDC88BA6NC98 1476 aa15.05■□□□□ 0
GRIK1-207ENST00000399914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
GRIK1-207ENST00000399914 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
GRIK1-207ENST00000399914 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
GRIK1-207ENST00000399914 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
GRIK1-207ENST00000399914 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
GRIK1-207ENST00000399914 SOGA1O94964 1423 aa14.98□□□□□ -0.01
GRIK1-207ENST00000399914 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.02
GRIK1-207ENST00000399914 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
GRIK1-207ENST00000399914 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
GRIK1-207ENST00000399914 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
GRIK1-207ENST00000399914 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
GRIK1-207ENST00000399914 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
GRIK1-207ENST00000399914 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
GRIK1-207ENST00000399914 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
GRIK1-207ENST00000399914 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
GRIK1-207ENST00000399914 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
GRIK1-207ENST00000399914 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
GRIK1-207ENST00000399914 TNIKQ9UKE5 1360 aa14.77□□□□□ -0.05
GRIK1-207ENST00000399914 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
GRIK1-207ENST00000399914 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
GRIK1-207ENST00000399914 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.06
GRIK1-207ENST00000399914 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
GRIK1-207ENST00000399914 EEA1Q15075 1411 aa14.7□□□□□ -0.06
GRIK1-207ENST00000399914 APLP2Q06481 763 aa14.69□□□□□ -0.06
GRIK1-207ENST00000399914 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
GRIK1-207ENST00000399914 CLIP1P30622 1438 aa14.62□□□□□ -0.07
GRIK1-207ENST00000399914 DIEXFQ68CQ4 756 aaKnown RBP14.61□□□□□ -0.07
GRIK1-207ENST00000399914 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
GRIK1-207ENST00000399914 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
GRIK1-207ENST00000399914 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
GRIK1-207ENST00000399914 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
GRIK1-207ENST00000399914 YTHDC1Q96MU7 727 aaKnown RBP14.48□□□□□ -0.09
GRIK1-207ENST00000399914 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
GRIK1-207ENST00000399914 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
GRIK1-207ENST00000399914 KIF21BO75037 1637 aa14.44□□□□□ -0.1
GRIK1-207ENST00000399914 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
GRIK1-207ENST00000399914 ITGAEP38570 1179 aa14.44□□□□□ -0.1
GRIK1-207ENST00000399914 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
GRIK1-207ENST00000399914 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
GRIK1-207ENST00000399914 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
GRIK1-207ENST00000399914 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
GRIK1-207ENST00000399914 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
GRIK1-207ENST00000399914 ATP1B4Q9UN42 357 aaPredicted RBP14.36□□□□□ -0.11
GRIK1-207ENST00000399914 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
GRIK1-207ENST00000399914 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
GRIK1-207ENST00000399914 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
GRIK1-207ENST00000399914 CUX1P39880 1505 aa14.34□□□□□ -0.11
GRIK1-207ENST00000399914 FBLN2P98095 1184 aa14.31□□□□□ -0.12
GRIK1-207ENST00000399914 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
GRIK1-207ENST00000399914 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
GRIK1-207ENST00000399914 MIER1Q8N108 512 aa14.3□□□□□ -0.12
GRIK1-207ENST00000399914 ARAP1Q96P48 1450 aa14.29□□□□□ -0.12
GRIK1-207ENST00000399914 MYT1Q01538 1121 aa14.28□□□□□ -0.12
GRIK1-207ENST00000399914 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
GRIK1-207ENST00000399914 CUX2O14529 1486 aa14.27□□□□□ -0.12
GRIK1-207ENST00000399914 CFTRP13569 1480 aa14.27□□□□□ -0.13
GRIK1-207ENST00000399914 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
GRIK1-207ENST00000399914 NESP48681 1621 aa14.25□□□□□ -0.13
GRIK1-207ENST00000399914 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
GRIK1-207ENST00000399914 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
GRIK1-207ENST00000399914 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
GRIK1-207ENST00000399914 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
GRIK1-207ENST00000399914 IGF1RP08069 1367 aa14.18□□□□□ -0.14
GRIK1-207ENST00000399914 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
GRIK1-207ENST00000399914 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
GRIK1-207ENST00000399914 DHX57Q6P158 1386 aaKnown RBP14.18□□□□□ -0.14
GRIK1-207ENST00000399914 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
GRIK1-207ENST00000399914 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
GRIK1-207ENST00000399914 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms