RNA–Protein interactions for RNA: ENST00000585603.5

POP4-202, Transcript of POP4 homolog, ribonuclease P/MRP subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POP4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POP4-202ENST00000585603 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
POP4-202ENST00000585603 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
POP4-202ENST00000585603 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
POP4-202ENST00000585603 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
POP4-202ENST00000585603 ABCC9O60706 1549 aa16.62■□□□□ 0.25
POP4-202ENST00000585603 ZCCHC6Q5VYS8 1495 aaKnown RBP16.55■□□□□ 0.24
POP4-202ENST00000585603 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
POP4-202ENST00000585603 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
POP4-202ENST00000585603 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
POP4-202ENST00000585603 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
POP4-202ENST00000585603 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
POP4-202ENST00000585603 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
POP4-202ENST00000585603 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
POP4-202ENST00000585603 NACADO15069 1562 aa15.78■□□□□ 0.12
POP4-202ENST00000585603 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
POP4-202ENST00000585603 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
POP4-202ENST00000585603 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
POP4-202ENST00000585603 HRCP23327 699 aa15.61■□□□□ 0.09
POP4-202ENST00000585603 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
POP4-202ENST00000585603 PPARGC1BQ86YN6 1023 aaKnown RBP15.5■□□□□ 0.07
POP4-202ENST00000585603 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
POP4-202ENST00000585603 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
POP4-202ENST00000585603 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
POP4-202ENST00000585603 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
POP4-202ENST00000585603 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
POP4-202ENST00000585603 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
POP4-202ENST00000585603 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
POP4-202ENST00000585603 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
POP4-202ENST00000585603 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
POP4-202ENST00000585603 WIZO95785 1651 aa15.14■□□□□ 0.01
POP4-202ENST00000585603 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
POP4-202ENST00000585603 SMARCA4P51532 1647 aa15.04■□□□□ -0
POP4-202ENST00000585603 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
POP4-202ENST00000585603 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
POP4-202ENST00000585603 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
POP4-202ENST00000585603 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
POP4-202ENST00000585603 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
POP4-202ENST00000585603 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
POP4-202ENST00000585603 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
POP4-202ENST00000585603 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
POP4-202ENST00000585603 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
POP4-202ENST00000585603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
POP4-202ENST00000585603 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
POP4-202ENST00000585603 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
POP4-202ENST00000585603 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
POP4-202ENST00000585603 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
POP4-202ENST00000585603 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
POP4-202ENST00000585603 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
POP4-202ENST00000585603 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
POP4-202ENST00000585603 SOGA1O94964 1423 aa14.59□□□□□ -0.07
POP4-202ENST00000585603 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
POP4-202ENST00000585603 NESP48681 1621 aa14.57□□□□□ -0.08
POP4-202ENST00000585603 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
POP4-202ENST00000585603 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
POP4-202ENST00000585603 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
POP4-202ENST00000585603 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
POP4-202ENST00000585603 CEP162Q5TB80 1403 aa14.49□□□□□ -0.09
POP4-202ENST00000585603 EEA1Q15075 1411 aa14.49□□□□□ -0.09
POP4-202ENST00000585603 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
POP4-202ENST00000585603 SYNJ1O43426 1573 aa14.4□□□□□ -0.11
POP4-202ENST00000585603 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
POP4-202ENST00000585603 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
POP4-202ENST00000585603 CFTRP13569 1480 aa14.36□□□□□ -0.11
POP4-202ENST00000585603 NEUROD1Q13562 356 aa14.35□□□□□ -0.11
POP4-202ENST00000585603 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
POP4-202ENST00000585603 GOLGA3Q08378 1498 aa14.33□□□□□ -0.12
POP4-202ENST00000585603 MYT1Q01538 1121 aa14.3□□□□□ -0.12
POP4-202ENST00000585603 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
POP4-202ENST00000585603 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
POP4-202ENST00000585603 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
POP4-202ENST00000585603 P3H3Q8IVL6 736 aa14.25□□□□□ -0.13
POP4-202ENST00000585603 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
POP4-202ENST00000585603 CUX1P39880 1505 aa14.23□□□□□ -0.13
POP4-202ENST00000585603 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
POP4-202ENST00000585603 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
POP4-202ENST00000585603 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
POP4-202ENST00000585603 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
POP4-202ENST00000585603 CLIP1P30622 1438 aa14.21□□□□□ -0.14
POP4-202ENST00000585603 APLP2Q06481 763 aa14.2□□□□□ -0.14
POP4-202ENST00000585603 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
POP4-202ENST00000585603 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
POP4-202ENST00000585603 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
POP4-202ENST00000585603 FBLN2P98095 1184 aa14.19□□□□□ -0.14
POP4-202ENST00000585603 ATP1B4Q9UN42 357 aaPredicted RBP14.18□□□□□ -0.14
POP4-202ENST00000585603 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
POP4-202ENST00000585603 KIF21BO75037 1637 aa14.17□□□□□ -0.14
POP4-202ENST00000585603 ARID3CA6NKF2 412 aa14.16□□□□□ -0.14
POP4-202ENST00000585603 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
POP4-202ENST00000585603 CUX2O14529 1486 aa14.13□□□□□ -0.15
POP4-202ENST00000585603 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
POP4-202ENST00000585603 MIER1Q8N108 512 aa14.11□□□□□ -0.15
POP4-202ENST00000585603 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
POP4-202ENST00000585603 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
POP4-202ENST00000585603 PRDM2Q13029 1718 aa14.09□□□□□ -0.15
POP4-202ENST00000585603 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
POP4-202ENST00000585603 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
POP4-202ENST00000585603 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
POP4-202ENST00000585603 KANK4Q5T7N3 995 aaPredicted RBP14.06□□□□□ -0.16
POP4-202ENST00000585603 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
POP4-202ENST00000585603 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms