RNA–Protein interactions for RNA: ENST00000339249.4

ZNF449-201, Transcript of zinc finger protein 449, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF449, Length 3,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF449-201ENST00000339249 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
ZNF449-201ENST00000339249 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
ZNF449-201ENST00000339249 ABCC9O60706 1549 aa13.57□□□□□ -0.24
ZNF449-201ENST00000339249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
ZNF449-201ENST00000339249 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
ZNF449-201ENST00000339249 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
ZNF449-201ENST00000339249 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
ZNF449-201ENST00000339249 NACADO15069 1562 aa12.4□□□□□ -0.42
ZNF449-201ENST00000339249 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
ZNF449-201ENST00000339249 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
ZNF449-201ENST00000339249 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
ZNF449-201ENST00000339249 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
ZNF449-201ENST00000339249 MYO15BQ96JP2 1530 aa11.97□□□□□ -0.49
ZNF449-201ENST00000339249 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
ZNF449-201ENST00000339249 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
ZNF449-201ENST00000339249 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
ZNF449-201ENST00000339249 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
ZNF449-201ENST00000339249 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
ZNF449-201ENST00000339249 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
ZNF449-201ENST00000339249 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
ZNF449-201ENST00000339249 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
ZNF449-201ENST00000339249 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
ZNF449-201ENST00000339249 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
ZNF449-201ENST00000339249 FBLN2P98095 1184 aa11.59□□□□□ -0.55
ZNF449-201ENST00000339249 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
ZNF449-201ENST00000339249 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
ZNF449-201ENST00000339249 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
ZNF449-201ENST00000339249 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
ZNF449-201ENST00000339249 NESP48681 1621 aa11.5□□□□□ -0.57
ZNF449-201ENST00000339249 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
ZNF449-201ENST00000339249 MROH2BQ7Z745 1585 aa11.41□□□□□ -0.58
ZNF449-201ENST00000339249 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
ZNF449-201ENST00000339249 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.58
ZNF449-201ENST00000339249 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
ZNF449-201ENST00000339249 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
ZNF449-201ENST00000339249 CUX2O14529 1486 aa11.33□□□□□ -0.6
ZNF449-201ENST00000339249 TTBK1Q5TCY1 1321 aaPredicted RBP11.29□□□□□ -0.6
ZNF449-201ENST00000339249 CYB5RLQ6IPT4 315 aa11.29□□□□□ -0.6
ZNF449-201ENST00000339249 HMGXB3Q12766 1538 aa11.29□□□□□ -0.6
ZNF449-201ENST00000339249 CEP164Q9UPV0 1460 aa11.28□□□□□ -0.6
ZNF449-201ENST00000339249 RSF1Q96T23 1441 aaPredicted RBP11.28□□□□□ -0.6
ZNF449-201ENST00000339249 CHMP7Q8WUX9 453 aaPredicted RBP11.27□□□□□ -0.6
ZNF449-201ENST00000339249 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
ZNF449-201ENST00000339249 WIZO95785 1651 aa11.22□□□□□ -0.61
ZNF449-201ENST00000339249 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.62
ZNF449-201ENST00000339249 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
ZNF449-201ENST00000339249 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
ZNF449-201ENST00000339249 AEBP2Q6ZN18 517 aaPredicted RBP11.1□□□□□ -0.63
ZNF449-201ENST00000339249 CCDC88BA6NC98 1476 aa11.09□□□□□ -0.63
ZNF449-201ENST00000339249 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
ZNF449-201ENST00000339249 CFTRP13569 1480 aa11.07□□□□□ -0.64
ZNF449-201ENST00000339249 FAM9AQ8IZU1 332 aaPredicted RBP11.06□□□□□ -0.64
ZNF449-201ENST00000339249 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
ZNF449-201ENST00000339249 TOP2AP11388 1531 aaKnown RBP11.05□□□□□ -0.64
ZNF449-201ENST00000339249 SOGA1O94964 1423 aa11.04□□□□□ -0.64
ZNF449-201ENST00000339249 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
ZNF449-201ENST00000339249 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
ZNF449-201ENST00000339249 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
ZNF449-201ENST00000339249 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
ZNF449-201ENST00000339249 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
ZNF449-201ENST00000339249 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
ZNF449-201ENST00000339249 ZNF608Q9ULD9 1512 aaPredicted RBP10.96□□□□□ -0.65
ZNF449-201ENST00000339249 ABCC8Q09428 1581 aa10.96□□□□□ -0.66
ZNF449-201ENST00000339249 RAD54L2Q9Y4B4 1467 aa10.95□□□□□ -0.66
ZNF449-201ENST00000339249 THOC2Q8NI27 1593 aaKnown RBP10.94□□□□□ -0.66
ZNF449-201ENST00000339249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
ZNF449-201ENST00000339249 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
ZNF449-201ENST00000339249 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
ZNF449-201ENST00000339249 WDR62O43379 1518 aa10.91□□□□□ -0.66
ZNF449-201ENST00000339249 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
ZNF449-201ENST00000339249 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
ZNF449-201ENST00000339249 FGD5Q6ZNL6 1462 aa10.85□□□□□ -0.67
ZNF449-201ENST00000339249 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
ZNF449-201ENST00000339249 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
ZNF449-201ENST00000339249 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
ZNF449-201ENST00000339249 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
ZNF449-201ENST00000339249 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
ZNF449-201ENST00000339249 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
ZNF449-201ENST00000339249 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
ZNF449-201ENST00000339249 GRIN2BQ13224 1484 aa10.79□□□□□ -0.68
ZNF449-201ENST00000339249 P3H3Q8IVL6 736 aa10.77□□□□□ -0.68
ZNF449-201ENST00000339249 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.68
ZNF449-201ENST00000339249 ARHGEF11O15085 1522 aa10.76□□□□□ -0.69
ZNF449-201ENST00000339249 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
ZNF449-201ENST00000339249 PLPPR3Q6T4P5 718 aa10.75□□□□□ -0.69
ZNF449-201ENST00000339249 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
ZNF449-201ENST00000339249 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
ZNF449-201ENST00000339249 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
ZNF449-201ENST00000339249 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
ZNF449-201ENST00000339249 CUX1P39880 1505 aa10.68□□□□□ -0.7
ZNF449-201ENST00000339249 MAGI1Q96QZ7 1491 aaPredicted RBP10.67□□□□□ -0.7
ZNF449-201ENST00000339249 SYNJ1O43426 1573 aa10.67□□□□□ -0.7
ZNF449-201ENST00000339249 PRG4Q92954 1404 aaPredicted RBP10.66□□□□□ -0.7
ZNF449-201ENST00000339249 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
ZNF449-201ENST00000339249 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
ZNF449-201ENST00000339249 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
ZNF449-201ENST00000339249 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
ZNF449-201ENST00000339249 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
ZNF449-201ENST00000339249 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
ZNF449-201ENST00000339249 PTPRGP23470 1445 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms