RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
APOBEC3D-201ENST00000216099 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
APOBEC3D-201ENST00000216099 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
APOBEC3D-201ENST00000216099 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
APOBEC3D-201ENST00000216099 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
APOBEC3D-201ENST00000216099 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
APOBEC3D-201ENST00000216099 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
APOBEC3D-201ENST00000216099 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
APOBEC3D-201ENST00000216099 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
APOBEC3D-201ENST00000216099 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
APOBEC3D-201ENST00000216099 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
APOBEC3D-201ENST00000216099 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
APOBEC3D-201ENST00000216099 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
APOBEC3D-201ENST00000216099 KCNA4P22459 653 aa18.89■□□□□ 0.61
APOBEC3D-201ENST00000216099 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
APOBEC3D-201ENST00000216099 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
APOBEC3D-201ENST00000216099 NACADO15069 1562 aa18.64■□□□□ 0.58
APOBEC3D-201ENST00000216099 ABCC9O60706 1549 aa18.58■□□□□ 0.56
APOBEC3D-201ENST00000216099 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
APOBEC3D-201ENST00000216099 PRKCSHP14314 528 aaPredicted RBP18.43■□□□□ 0.54
APOBEC3D-201ENST00000216099 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
APOBEC3D-201ENST00000216099 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
APOBEC3D-201ENST00000216099 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
APOBEC3D-201ENST00000216099 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
APOBEC3D-201ENST00000216099 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3D-201ENST00000216099 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
APOBEC3D-201ENST00000216099 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
APOBEC3D-201ENST00000216099 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
APOBEC3D-201ENST00000216099 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
APOBEC3D-201ENST00000216099 ADRA2BP18089 450 aa17.92■□□□□ 0.46
APOBEC3D-201ENST00000216099 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
APOBEC3D-201ENST00000216099 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
APOBEC3D-201ENST00000216099 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
APOBEC3D-201ENST00000216099 WIZO95785 1651 aa17.81■□□□□ 0.44
APOBEC3D-201ENST00000216099 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
APOBEC3D-201ENST00000216099 TIMELESSQ9UNS1 1208 aa17.75■□□□□ 0.43
APOBEC3D-201ENST00000216099 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
APOBEC3D-201ENST00000216099 ZBTB22O15209 634 aa17.64■□□□□ 0.41
APOBEC3D-201ENST00000216099 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
APOBEC3D-201ENST00000216099 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
APOBEC3D-201ENST00000216099 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
APOBEC3D-201ENST00000216099 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
APOBEC3D-201ENST00000216099 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
APOBEC3D-201ENST00000216099 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3D-201ENST00000216099 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
APOBEC3D-201ENST00000216099 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
APOBEC3D-201ENST00000216099 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
APOBEC3D-201ENST00000216099 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
APOBEC3D-201ENST00000216099 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
APOBEC3D-201ENST00000216099 ARXQ96QS3 562 aa17.25■□□□□ 0.35
APOBEC3D-201ENST00000216099 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
APOBEC3D-201ENST00000216099 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
APOBEC3D-201ENST00000216099 BCANQ96GW7 911 aa17.16■□□□□ 0.34
APOBEC3D-201ENST00000216099 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
APOBEC3D-201ENST00000216099 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
APOBEC3D-201ENST00000216099 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
APOBEC3D-201ENST00000216099 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3D-201ENST00000216099 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
APOBEC3D-201ENST00000216099 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
APOBEC3D-201ENST00000216099 EEA1Q15075 1411 aa16.97■□□□□ 0.31
APOBEC3D-201ENST00000216099 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
APOBEC3D-201ENST00000216099 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
APOBEC3D-201ENST00000216099 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
APOBEC3D-201ENST00000216099 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
APOBEC3D-201ENST00000216099 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
APOBEC3D-201ENST00000216099 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
APOBEC3D-201ENST00000216099 FKBP8Q14318 412 aa16.92■□□□□ 0.3
APOBEC3D-201ENST00000216099 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
APOBEC3D-201ENST00000216099 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
APOBEC3D-201ENST00000216099 MYT1Q01538 1121 aa16.88■□□□□ 0.29
APOBEC3D-201ENST00000216099 CFTRP13569 1480 aa16.86■□□□□ 0.29
APOBEC3D-201ENST00000216099 SOGA1O94964 1423 aa16.84■□□□□ 0.29
APOBEC3D-201ENST00000216099 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
APOBEC3D-201ENST00000216099 HOMEZQ8IX15 550 aa16.81■□□□□ 0.28
APOBEC3D-201ENST00000216099 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
APOBEC3D-201ENST00000216099 KIF21BO75037 1637 aa16.79■□□□□ 0.28
APOBEC3D-201ENST00000216099 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
APOBEC3D-201ENST00000216099 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
APOBEC3D-201ENST00000216099 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
APOBEC3D-201ENST00000216099 CUX1P39880 1505 aa16.73■□□□□ 0.27
APOBEC3D-201ENST00000216099 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
APOBEC3D-201ENST00000216099 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
APOBEC3D-201ENST00000216099 APLP2Q06481 763 aa16.69■□□□□ 0.26
APOBEC3D-201ENST00000216099 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
APOBEC3D-201ENST00000216099 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
APOBEC3D-201ENST00000216099 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
APOBEC3D-201ENST00000216099 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
APOBEC3D-201ENST00000216099 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
APOBEC3D-201ENST00000216099 FBLN2P98095 1184 aa16.63■□□□□ 0.25
APOBEC3D-201ENST00000216099 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
APOBEC3D-201ENST00000216099 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
APOBEC3D-201ENST00000216099 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
APOBEC3D-201ENST00000216099 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
APOBEC3D-201ENST00000216099 HRCP23327 699 aa16.55■□□□□ 0.24
APOBEC3D-201ENST00000216099 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
APOBEC3D-201ENST00000216099 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
APOBEC3D-201ENST00000216099 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
APOBEC3D-201ENST00000216099 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
APOBEC3D-201ENST00000216099 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
APOBEC3D-201ENST00000216099 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms