RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
DHX40-201ENST00000251241 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
DHX40-201ENST00000251241 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
DHX40-201ENST00000251241 ABCC9O60706 1549 aa16.91■□□□□ 0.3
DHX40-201ENST00000251241 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
DHX40-201ENST00000251241 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
DHX40-201ENST00000251241 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
DHX40-201ENST00000251241 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
DHX40-201ENST00000251241 NACADO15069 1562 aa16.28■□□□□ 0.2
DHX40-201ENST00000251241 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
DHX40-201ENST00000251241 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
DHX40-201ENST00000251241 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
DHX40-201ENST00000251241 MYT1Q01538 1121 aa16.12■□□□□ 0.17
DHX40-201ENST00000251241 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
DHX40-201ENST00000251241 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
DHX40-201ENST00000251241 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
DHX40-201ENST00000251241 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
DHX40-201ENST00000251241 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
DHX40-201ENST00000251241 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
DHX40-201ENST00000251241 HRCP23327 699 aa15.71■□□□□ 0.11
DHX40-201ENST00000251241 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
DHX40-201ENST00000251241 BCL11AQ9H165 835 aa15.57■□□□□ 0.08
DHX40-201ENST00000251241 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
DHX40-201ENST00000251241 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.07
DHX40-201ENST00000251241 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
DHX40-201ENST00000251241 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
DHX40-201ENST00000251241 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
DHX40-201ENST00000251241 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
DHX40-201ENST00000251241 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
DHX40-201ENST00000251241 SMARCA4P51532 1647 aa15.33■□□□□ 0.05
DHX40-201ENST00000251241 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
DHX40-201ENST00000251241 WIZO95785 1651 aa15.27■□□□□ 0.03
DHX40-201ENST00000251241 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
DHX40-201ENST00000251241 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
DHX40-201ENST00000251241 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
DHX40-201ENST00000251241 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
DHX40-201ENST00000251241 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
DHX40-201ENST00000251241 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
DHX40-201ENST00000251241 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
DHX40-201ENST00000251241 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
DHX40-201ENST00000251241 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
DHX40-201ENST00000251241 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
DHX40-201ENST00000251241 TRIM41Q8WV44 630 aa15.08■□□□□ 0
DHX40-201ENST00000251241 NCAPD3P42695 1498 aa15.05■□□□□ 0
DHX40-201ENST00000251241 CENPBP07199 599 aaPredicted RBP15.05■□□□□ 0
DHX40-201ENST00000251241 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
DHX40-201ENST00000251241 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
DHX40-201ENST00000251241 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
DHX40-201ENST00000251241 HMGXB3Q12766 1538 aa14.96□□□□□ -0.01
DHX40-201ENST00000251241 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.01
DHX40-201ENST00000251241 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
DHX40-201ENST00000251241 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
DHX40-201ENST00000251241 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
DHX40-201ENST00000251241 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
DHX40-201ENST00000251241 NESP48681 1621 aa14.73□□□□□ -0.05
DHX40-201ENST00000251241 SLC24A1O60721 1099 aa14.72□□□□□ -0.05
DHX40-201ENST00000251241 APLP2Q06481 763 aa14.72□□□□□ -0.05
DHX40-201ENST00000251241 ANO8Q9HCE9 1232 aaPredicted RBP14.72□□□□□ -0.05
DHX40-201ENST00000251241 CCDC136Q96JN2 1154 aa14.68□□□□□ -0.06
DHX40-201ENST00000251241 CFTRP13569 1480 aa14.67□□□□□ -0.06
DHX40-201ENST00000251241 ANP32EQ9BTT0 268 aa14.64□□□□□ -0.07
DHX40-201ENST00000251241 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
DHX40-201ENST00000251241 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
DHX40-201ENST00000251241 TRIM26Q12899 539 aaPredicted RBP14.61□□□□□ -0.07
DHX40-201ENST00000251241 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
DHX40-201ENST00000251241 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
DHX40-201ENST00000251241 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
DHX40-201ENST00000251241 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
DHX40-201ENST00000251241 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
DHX40-201ENST00000251241 EIF5BO60841 1220 aaKnown RBP14.52□□□□□ -0.09
DHX40-201ENST00000251241 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
DHX40-201ENST00000251241 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
DHX40-201ENST00000251241 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
DHX40-201ENST00000251241 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
DHX40-201ENST00000251241 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
DHX40-201ENST00000251241 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
DHX40-201ENST00000251241 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
DHX40-201ENST00000251241 CUX1P39880 1505 aa14.4□□□□□ -0.1
DHX40-201ENST00000251241 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
DHX40-201ENST00000251241 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
DHX40-201ENST00000251241 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
DHX40-201ENST00000251241 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
DHX40-201ENST00000251241 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
DHX40-201ENST00000251241 SALL2Q9Y467 1007 aaPredicted RBP14.33□□□□□ -0.12
DHX40-201ENST00000251241 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
DHX40-201ENST00000251241 SOGA1O94964 1423 aa14.32□□□□□ -0.12
DHX40-201ENST00000251241 ZEB1P37275 1124 aaPredicted RBP14.31□□□□□ -0.12
DHX40-201ENST00000251241 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
DHX40-201ENST00000251241 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
DHX40-201ENST00000251241 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
DHX40-201ENST00000251241 BIVM-ERCC5R4GMW8 1640 aa14.28□□□□□ -0.12
DHX40-201ENST00000251241 RUSC2Q8N2Y8 1516 aa14.26□□□□□ -0.13
DHX40-201ENST00000251241 CUX2O14529 1486 aa14.25□□□□□ -0.13
DHX40-201ENST00000251241 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
DHX40-201ENST00000251241 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
DHX40-201ENST00000251241 BCANQ96GW7 911 aa14.23□□□□□ -0.13
DHX40-201ENST00000251241 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
DHX40-201ENST00000251241 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
DHX40-201ENST00000251241 WDR62O43379 1518 aa14.22□□□□□ -0.13
DHX40-201ENST00000251241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms