Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.74□□□□□ -0.05
VGLL1Q99990 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.74□□□□□ -0.05
VGLL1Q99990 KRT18P5-201ENST00000436075 1291 ntBASIC14.74□□□□□ -0.05
VGLL1Q99990 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.74□□□□□ -0.05
VGLL1Q99990 C2orf69P4-201ENST00000565394 541 ntBASIC14.74□□□□□ -0.05
VGLL1Q99990 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.74□□□□□ -0.05
VGLL1Q99990 AC008694.1-202ENST00000636953 945 ntBASIC14.74□□□□□ -0.05
VGLL1Q99990 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VGLL1Q99990 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VGLL1Q99990 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VGLL1Q99990 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.74□□□□□ -0.05
VGLL1Q99990 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.74□□□□□ -0.05
VGLL1Q99990 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VGLL1Q99990 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VGLL1Q99990 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.74□□□□□ -0.05
VGLL1Q99990 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.73□□□□□ -0.05
VGLL1Q99990 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.73□□□□□ -0.05
VGLL1Q99990 AC023632.3-201ENST00000521633 145 ntBASIC14.73□□□□□ -0.05
VGLL1Q99990 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VGLL1Q99990 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VGLL1Q99990 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.72□□□□□ -0.05
VGLL1Q99990 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.72□□□□□ -0.05
VGLL1Q99990 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
VGLL1Q99990 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.72□□□□□ -0.05
VGLL1Q99990 RARRES2P6-201ENST00000567333 442 ntBASIC14.72□□□□□ -0.05
VGLL1Q99990 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 AL589743.5-201ENST00000616611 1050 ntBASIC14.72□□□□□ -0.05
VGLL1Q99990 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.72□□□□□ -0.05
VGLL1Q99990 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.72□□□□□ -0.05
VGLL1Q99990 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.72□□□□□ -0.05
VGLL1Q99990 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VGLL1Q99990 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.72□□□□□ -0.05
VGLL1Q99990 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VGLL1Q99990 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VGLL1Q99990 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.71□□□□□ -0.05
VGLL1Q99990 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VGLL1Q99990 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VGLL1Q99990 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.71□□□□□ -0.05
VGLL1Q99990 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.71□□□□□ -0.05
VGLL1Q99990 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.71□□□□□ -0.05
VGLL1Q99990 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.71□□□□□ -0.05
VGLL1Q99990 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 AC010980.2-201ENST00000587099 1412 ntBASIC14.71□□□□□ -0.05
VGLL1Q99990 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.71□□□□□ -0.05
VGLL1Q99990 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VGLL1Q99990 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms