Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BARD1Q99728 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.6■□□□□ 0.57
BARD1Q99728 RPS2P55-201ENST00000397318 883 ntBASIC18.6■□□□□ 0.57
BARD1Q99728 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 AC107956.1-201ENST00000494359 873 ntBASIC18.6■□□□□ 0.57
BARD1Q99728 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.6■□□□□ 0.57
BARD1Q99728 MTDHP1-201ENST00000605323 784 ntBASIC18.6■□□□□ 0.57
BARD1Q99728 LINC01023-201ENST00000606054 436 ntBASIC18.6■□□□□ 0.57
BARD1Q99728 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
BARD1Q99728 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BARD1Q99728 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.6■□□□□ 0.57
BARD1Q99728 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BARD1Q99728 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.6■□□□□ 0.57
BARD1Q99728 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.59■□□□□ 0.57
BARD1Q99728 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 BX119927.1-201ENST00000636596 1552 ntBASIC18.59■□□□□ 0.57
BARD1Q99728 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.59■□□□□ 0.57
BARD1Q99728 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.59■□□□□ 0.57
BARD1Q99728 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
BARD1Q99728 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BARD1Q99728 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.59■□□□□ 0.57
BARD1Q99728 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BARD1Q99728 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BARD1Q99728 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BARD1Q99728 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BARD1Q99728 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
BARD1Q99728 KRT8P36-201ENST00000489121 1440 ntBASIC18.58■□□□□ 0.57
BARD1Q99728 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.58■□□□□ 0.57
BARD1Q99728 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
BARD1Q99728 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
BARD1Q99728 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
BARD1Q99728 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BARD1Q99728 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.58■□□□□ 0.57
BARD1Q99728 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.58■□□□□ 0.56
BARD1Q99728 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.58■□□□□ 0.56
BARD1Q99728 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.58■□□□□ 0.56
BARD1Q99728 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
BARD1Q99728 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
BARD1Q99728 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.58■□□□□ 0.56
BARD1Q99728 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BARD1Q99728 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.58■□□□□ 0.56
BARD1Q99728 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.58■□□□□ 0.56
BARD1Q99728 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
BARD1Q99728 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.57■□□□□ 0.56
BARD1Q99728 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.57■□□□□ 0.56
BARD1Q99728 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BARD1Q99728 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.57■□□□□ 0.56
BARD1Q99728 MIR1224-201ENST00000408193 85 ntBASIC18.57■□□□□ 0.56
BARD1Q99728 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.57■□□□□ 0.56
BARD1Q99728 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BARD1Q99728 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.57■□□□□ 0.56
BARD1Q99728 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.57■□□□□ 0.56
BARD1Q99728 C2orf69P4-201ENST00000565394 541 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms