Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL138781.1-201ENST00000566567 1274 ntBASIC17.68■□□□□ 0.42
SNX18Q96RF0 AC142086.2-201ENST00000569753 217 ntBASIC17.68■□□□□ 0.42
SNX18Q96RF0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 AP000997.3-201ENST00000623333 2250 ntBASIC17.67■□□□□ 0.42
SNX18Q96RF0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 CD99P1-205ENST00000527459 561 ntBASIC17.67■□□□□ 0.42
SNX18Q96RF0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 PHGDH-210ENST00000641115 1638 ntBASIC17.67■□□□□ 0.42
SNX18Q96RF0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 AC005332.7-201ENST00000614046 2005 ntBASIC17.67■□□□□ 0.42
SNX18Q96RF0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX18Q96RF0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX18Q96RF0 KRT17P1-201ENST00000399211 1546 ntBASIC17.67■□□□□ 0.42
SNX18Q96RF0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 AC093787.1-201ENST00000450396 207 ntBASIC17.66■□□□□ 0.42
SNX18Q96RF0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX18Q96RF0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX18Q96RF0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 ABHD17AP1-201ENST00000358206 933 ntBASIC17.65■□□□□ 0.42
SNX18Q96RF0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX18Q96RF0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX18Q96RF0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.64■□□□□ 0.42
SNX18Q96RF0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX18Q96RF0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX18Q96RF0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX18Q96RF0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX18Q96RF0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms